RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 IHHQ14623 411 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 GEN1Q17RS7 908 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 MS4A13Q5J8X5 152 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 IYDQ6PHW0 289 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CYP2R1Q6VVX0 501 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 OR52K2Q8NGK3 314 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SOCS4Q8WXH5 440 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 LPGAT1Q92604 370 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 TOP1MTQ969P6 601 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 UROC1Q96N76 676 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SLC39A3Q9BRY0 314 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 MRPS26Q9BYN8 205 aaKnown RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 EPB41L1Q9H4G0 881 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 FBRSL1Q9HCM7 1045 aaKnown RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 NDUFA13Q9P0J0 144 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 KCTD3Q9Y597 815 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 MROH6A6NGR9 719 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 NRP2O60462 931 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 S1PR4O95977 384 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 TFAP2AP05549 437 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SLC2A3P11169 496 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 TYMPP19971 482 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 RHDQ02161 417 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 EFEMP1Q12805 493 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 DDR2Q16832 855 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 KIF19Q2TAC6 998 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 MAP7D1Q3KQU3 841 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 MGAT5BQ3V5L5 792 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ZNF678Q5SXM1 525 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ARMC3Q5W041 872 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 FAM45BPQ6NSW5 357 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 GALNT7Q86SF2 657 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ISCA2Q86U28 154 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CIR1Q86X95 450 aaPredicted RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 FAM45AQ8TCE6 357 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SH3RF2Q8TEC5 729 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 LRTOMTQ8WZ04 291 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 PTERQ96BW5 349 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SLC39A13Q96H72 371 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 C1orf74Q96LT6 269 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 PRDM5Q9NQX1 630 aaPredicted RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 TMEM248Q9NWD8 314 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 GMIPQ9P107 970 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SARDHQ9UL12 918 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SNX13Q9Y5W8 968 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 PLXNA3P51805 1871 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 GJB3O75712 270 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CAPNS1P04632 268 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 PSMC3P17980 439 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 KCNC1P48547 511 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SLC7A2P52569 658 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CDH13P55290 713 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 HERVK_113P63132 956 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SLC5A9Q2M3M2 681 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
RFX3-202ENST00000358730 NADK2Q4G0N4 442 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SAMD4BQ5PRF9 694 aaKnown RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 C6orf10Q5SRN2 563 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 IL31Q6EBC2 164 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CYHR1Q6ZMK1 362 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 RBM44Q6ZP01 1051 aaKnown RBP8.61□□□□□ -1.03
RFX3-202ENST00000358730 MON1AQ86VX9 555 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 HERC6Q8IVU3 1022 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ZNF683Q8IZ20 524 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 METTL25Q8N6Q8 603 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 BLOC1S5Q8TDH9 187 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 L3HYPDHQ96EM0 354 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 ERVK-6Q9BXR3 956 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 CROTQ9UKG9 612 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 SCML2Q9UQR0 700 aa8.61□□□□□ -1.03
RFX3-202ENST00000358730 NR5A2O00482 541 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 LDB2O43679 373 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 WISP3O95389 354 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 STAMBPO95630 424 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 ALDOCP09972 364 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 ATXN1LP0C7T5 689 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 ZNF26P17031 533 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 GRK4P32298 578 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 SH3BGRP55822 239 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 NME5P56597 212 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 NFKB2Q00653 900 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 LSAMPQ13449 338 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 LPIN1Q14693 890 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 UNC50Q53HI1 259 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 MTX3Q5HYI7 312 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 RAP1GAP2Q684P5 730 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 MSANTD2Q6P1R3 559 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 LARP4Q71RC2 724 aaKnown RBP eCLIP8.6□□□□□ -1.03
RFX3-202ENST00000358730 MIB1Q86YT6 1006 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 NUP93Q8N1F7 819 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PGBD5Q8N414 524 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PTGR2Q8N8N7 351 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 RIN3Q8TB24 985 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 DNAJC1Q96KC8 554 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms