RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TFAP2DQ7Z6R9 452 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 STARD8Q92502 1023 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 EMID1Q96A84 441 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-205ENST00000357568 GBA3Q9H227 469 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SETD4Q9NVD3 440 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 SNX9Q9Y5X1 595 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 CPQQ9Y646 472 aa10.7□□□□□ -0.7
CAPN3-205ENST00000357568 LACTBL1A8MY62 500 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 CLDN25C9JDP6 229 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 XPOTO43592 962 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 NTRK1P04629 796 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 UGT2B4P06133 528 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GOT1P17174 413 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 TFE3P19532 575 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 FUT4P22083 530 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GRIA3P42263 894 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 MRPL19P49406 292 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 EIF2B2P49770 351 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 STAT5BP51692 787 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 SLC7A2P52569 658 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 HNRNPFP52597 415 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GABARAPL2P60520 117 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 SP2Q02086 613 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RALGDSQ12967 914 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 JADE1Q6IE81 842 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 BNIPLQ7Z465 357 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 IGFN1Q86VF2 1251 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 UNC93AQ86WB7 457 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 TBC1D21Q8IYX1 336 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 ADGRG5Q8IZF4 528 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RNF149Q8NC42 400 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 PTCD2Q8WV60 388 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 VMP1Q96GC9 406 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 MARK4Q96L34 752 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 UBXN10Q96LJ8 280 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 HEPHQ9BQS7 1158 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 HGH1Q9BTY7 390 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RAD21L1Q9H4I0 556 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 HMG20AQ9NP66 347 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 DOLKQ9UPQ8 538 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 KRBA1A5PL33 1030 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 CARNS1A5YM72 827 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 SAC3D1A6NKF1 404 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GPC4O75487 556 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GSTM2P28161 218 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 ARCN1P48444 511 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 ZNF135P52742 658 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 TRIM32Q13049 653 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 ATP1A4Q13733 1029 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GTF2IRD2BQ6EKJ0 949 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 CES3Q6UWW8 571 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 LINC00523Q86TU6 105 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 GTF2IRD2Q86UP8 949 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 PTRH1Q86Y79 214 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 SDR16C5Q8N3Y7 309 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RNF139Q8WU17 664 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 OSCP1Q8WVF1 389 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 KCTD4Q8WVF5 259 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 TAMM41Q96BW9 452 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 BTN2A3PQ96KV6 586 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 ALPK1Q96QP1 1244 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 MCOLN1Q9GZU1 580 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 IARS2Q9NSE4 1012 aaKnown RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 PRMT7Q9NVM4 692 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-205ENST00000357568 VWA7Q9Y334 891 aa10.69□□□□□ -0.7
CAPN3-205ENST00000357568 RNF103-CHMP3A0A140T963 221 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 E2F8A0AVK6 867 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 GSTT2P0CG29 244 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 GSTT2BP0CG30 244 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PTPN3P26045 913 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 RFC2P35250 354 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 CCR10P46092 362 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 RPS9P46781 194 aaKnown RBP10.68□□□□□ -0.7
CAPN3-205ENST00000357568 RXRGP48443 463 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 HCAR3P49019 387 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 RGS7P49802 495 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 STX1BP61266 288 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 TRAF2Q12933 501 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 CLPPQ16740 277 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PRAMEF19Q5SWL8 479 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 BSPRYQ5W0U4 402 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 NEPROQ6NW34 567 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 CYP2R1Q6VVX0 501 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PID1Q7Z2X4 250 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 SLC22A9Q8IVM8 553 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PARP8Q8N3A8 854 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 CCDC185Q8N715 623 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 HSFY1Q96LI6 401 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PPP1R36Q96LQ0 422 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.68□□□□□ -0.7
CAPN3-205ENST00000357568 PRDM12Q9H4Q4 367 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 KLHL8Q9P2G9 620 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-205ENST00000357568 IFT80Q9P2H3 777 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-205ENST00000357568 HES2Q9Y543 173 aa10.68□□□□□ -0.7
CAPN3-205ENST00000357568 DCLK1O15075 740 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms