RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KLK6Q92876 244 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 TSPAN5P62079 268 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SEMA5AQ13591 1074 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PEX6Q13608 980 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 TAPT1Q6NXT6 567 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SLC22A15Q8IZD6 547 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 SLC34A3Q8N130 599 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PACSIN3Q9UKS6 424 aa17.3■□□□□ 0.36
COL27A1-201ENST00000356083 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
COL27A1-201ENST00000356083 PRR36Q9H6K5 1346 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 A0A1B0GTH6 734 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CAMTA2O94983 1202 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ADH1CP00326 375 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ERVK-21P61565 698 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ENPEPQ07075 957 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 TLR1Q15399 786 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 KLHL35Q6PF15 583 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 C1GALT1C1Q96EU7 318 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 C11orf24Q96F05 449 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 PNPLA8Q9NP80 782 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 GJB6O95452 261 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CDH5P33151 784 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ZDHHC20Q5W0Z9 365 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 SMARCD3Q6STE5 483 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 SLC28A3Q9HAS3 691 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF226Q9NYT6 803 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 OR1I1O60431 355 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 AP2S1P53680 142 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 SOCS4Q8WXH5 440 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 C1orf50Q9BV19 199 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 RFXANKO14593 260 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 UBOX5O94941 541 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ARHGEF19Q8IW93 802 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 FRMD8P1Q9BZ68 369 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 THAP1Q9NVV9 213 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CHD1O14646 1710 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 GNB5O14775 395 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CYP1A1P04798 512 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ASMTP46597 345 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 MAN2A2P49641 1150 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 RIPK1Q13546 671 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 C15orf59Q2T9L4 293 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 C1orf189Q5VU69 101 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 FAM172BPA6NC97 362 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CYP17A1P05093 508 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 PRKAR1AP10644 381 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 NPR3P17342 541 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 SLC20A2Q08357 652 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 TOP3AQ13472 1001 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-201ENST00000356083 ZCCHC10Q8TBK6 192 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 FAM110BQ8TC76 370 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 PTPN18Q99952 460 aa17.29■□□□□ 0.36
COL27A1-201ENST00000356083 CLDN5O00501 218 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SLC31A1O15431 190 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF16P17020 682 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 CDH3P22223 829 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 FAUP35544 74 aaKnown RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 RPL21P46778 160 aaKnown RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 RAB27AP51159 221 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 PPATQ06203 517 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 CLHC1Q8NHS4 586 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 C3orf18Q9UK00 162 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 IL12AP29459 219 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 MAPK14Q16539 360 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 LOC110117498-PIK3R3F6TDL0 507 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 MAFKO60675 156 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 NRG1Q02297 640 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SGK2Q9HBY8 427 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 EGFL7Q9UHF1 273 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ALOX5P09917 674 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ECHS1P30084 290 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 GP5P40197 560 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 TNFAIP8L1Q8WVP5 186 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 OVCA2Q8WZ82 227 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 TDRD1Q9BXT4 1180 aaKnown RBP17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ARHGEF33A8MVX0 844 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SLC6A9P48067 706 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 MTTPP55157 894 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SLC13A2Q13183 592 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 C11orf65Q8NCR3 313 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 OR52E6Q96RD3 313 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 CITED4Q96RK1 184 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SERPINB7O75635 380 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SEC24AO95486 1093 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ADH1AP07327 375 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 AXLP30530 894 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 CDCA5Q96FF9 252 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 ULBP1Q9BZM6 244 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
COL27A1-201ENST00000356083 SPAG17Q6Q759 2223 aa17.27■□□□□ 0.36
COL27A1-201ENST00000356083 GABRR2P28476 465 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms