RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TCF3P15923 654 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 ZFXP17010 805 aaPredicted RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 ADORA2BP29275 332 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 MIPP30301 263 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 CDKN2BP42772 138 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 DNA2P51530 1060 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 TAS2R40P59535 323 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SRSF3P84103 164 aaKnown RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 CAV1Q03135 178 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 CLCQ05315 142 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 ADIGQ0VDE8 80 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 GRIK2Q13002 908 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 GPS2Q13227 327 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SIX1Q15475 284 aaPredicted RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 EOGTQ5NDL2 527 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 BEND6Q5SZJ8 279 aaPredicted RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 OR6B2Q6IFH4 312 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SLC41A1Q8IVJ1 513 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SFTPA1Q8IWL2 248 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 GALNT15Q8N3T1 639 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC89Q8N998 374 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 STKLD1Q8NE28 680 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 JOSD2Q8TAC2 188 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 UBA3Q8TBC4 463 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 RXFP2Q8WXD0 754 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 MYLPFQ96A32 169 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 FAF2Q96CS3 445 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SPATA17Q96L03 361 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 KRT12Q99456 494 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 RHOXF2Q9BQY4 288 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 PLCD4Q9BRC7 762 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 ERP44Q9BS26 406 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 LRRC1Q9BTT6 524 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 B3GNT5Q9BYG0 378 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 TRIM7Q9C029 511 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 FBXO44Q9H4M3 255 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 PRORYQ9H606 182 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 SUSD2Q9UGT4 822 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 DRG1Q9Y295 367 aaKnown RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 RAD54BQ9Y620 910 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 V9GYY5 206 aaPredicted RBP7.11□□□□□ -1.27
VPS13A-201ENST00000355766 THADAQ6YHU6 1953 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 PLXND1Q9Y4D7 1925 aa7.11□□□□□ -1.27
VPS13A-201ENST00000355766 ACACAQ13085 2346 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 TRAV19A0A0A6YYK7 116 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 IGHV1OR15-9A0A0B4J2B8 117 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 LRRD1A4D1F6 860 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CFAP69A5D8W1 941 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 TRABD2BA6NFA1 517 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CAPN8A6NHC0 703 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 C3orf70A6NLC5 250 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 HHLA1C9JL84 531 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 E9PAM4 449 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 HRKO00198 91 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 MAP2K7O14733 419 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CAPN9O14815 690 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 RAD51CO43502 376 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 SIGLEC6O43699 453 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CLEC3AO75596 197 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 TRUB2O95900 331 aaKnown RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 ZBED1O96006 694 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CYP17A1P05093 508 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CKMP06732 381 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 ITGAVP06756 1048 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CSH1P0DML2 217 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CSH2P0DML3 217 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 RALAP11233 206 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 PNLIPP16233 465 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 TGM2P21980 687 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 FLT3P36888 993 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 COILP38432 576 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 EIF2DP41214 584 aaKnown RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 BUD31P41223 144 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 NR2C2P49116 596 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 ARSEP51690 589 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 TKTL1P51854 596 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CDR1P51861 262 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 DAOAP59103 153 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 PTK6Q13882 451 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 PLEKHG6Q3KR16 790 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC14Q49A88 953 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 C2CD6Q53TS8 623 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 DUPD1Q68J44 220 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC137Q6PK04 289 aaKnown RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 C4orf22Q6V702 233 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CYP4V2Q6ZWL3 525 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 BZW1Q7L1Q6 419 aaKnown RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 NLRC3Q7RTR2 1065 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 MARCH9Q86YJ5 346 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 JAMLQ86YT9 394 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 SPATA2LQ8IUW3 424 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 CNPY4Q8N129 248 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 ZNF276Q8N554 614 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 DEFB119Q8N690 84 aa7.1□□□□□ -1.27
VPS13A-201ENST00000355766 ARFGAP1Q8N6T3 406 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms