RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZSWIM9Q86XI8 627 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 DENND6AQ8IWF6 608 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SFTPA1Q8IWL2 248 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 KDM1BQ8NB78 822 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 OR4K2Q8NGD2 314 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CSGALNACT1Q8TDX6 532 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 ALKBH8Q96BT7 664 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CHFRQ96EP1 664 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SRPK1Q96SB4 655 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 KLF6Q99612 283 aaPredicted RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 GPR63Q9BZJ6 419 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 MTG2Q9H4K7 406 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SSU72Q9NP77 194 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SMG5Q9UPR3 1016 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 MBTPS2O43462 519 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 KAT7O95251 611 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 F7P08709 466 aaPredicted RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CHN1P15882 459 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SLC1A2P43004 574 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SKIV2LQ15477 1246 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 TIFABQ6ZNK6 161 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 MICALCLQ6ZW33 695 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 LMNTD2Q8IXW0 634 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 ATXN7L3BQ96GX2 97 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CDKN2AIPNLQ96HQ2 116 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 IL36AQ9UHA7 158 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 FBXO5Q9UKT4 447 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 OR51F1A6NGY5 319 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 CAPN8A6NHC0 703 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 FAM47DPA6NHR8 397 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 C2CD4DB7Z1M9 353 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 STX7O15400 261 aaKnown RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 PRPF4O43172 522 aaKnown RBP eCLIP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 LEFTY1O75610 366 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 RFPL1O75677 317 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 APODP05090 189 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 PYGBP11216 843 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 PSMA3P25788 255 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 GRIA2P42262 883 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 MPP1Q00013 466 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 GUCY1A3Q02108 690 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF234Q14588 700 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 TTC19Q6DKK2 380 aaPredicted RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 FSTL4Q6MZW2 842 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 KIAA0408Q6ZU52 694 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 USP45Q70EL2 814 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 LYSMD3Q7Z3D4 306 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 ANKRD42Q8N9B4 389 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 VPS39Q96JC1 886 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 KLHL32Q96NJ5 620 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 MCMBPQ9BTE3 642 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 OSBPL1AQ9BXW6 950 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 RHOJQ9H4E5 214 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 SUDS3Q9H7L9 328 aaPredicted RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
HOXA1-202ENST00000355633 PPIL1Q9Y3C6 166 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 BRWD1Q9NSI6 2320 aa13.65□□□□□ -0.22
HOXA1-202ENST00000355633 A0A0U1RQS6 177 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 CCDC162PA2VCL2 907 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 A6NNZ2 444 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 TYROBPO43914 113 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 AHSGP02765 367 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 HNF1BP35680 557 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 HADHAP40939 763 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 ABCG1P45844 678 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 SOX9P48436 509 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 SLC18A2Q05940 514 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 TUBB8Q3ZCM7 444 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 SH2D5Q6ZV89 423 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 ZC3HC1Q86WB0 502 aaKnown RBP13.64□□□□□ -0.23
HOXA1-202ENST00000355633 BANPQ8N9N5 519 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 OR4L1Q8NH43 312 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 LYSMD1Q96S90 227 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 ZFYVE1Q9HBF4 777 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 NKIRAS1Q9NYS0 192 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 PKP3Q9Y446 797 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 C1orf232A0A0U1RR37 186 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 EDDM13A0A1B0GTR0 161 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 CTSLP07711 333 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 HLA-EP13747 358 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 GABRB3P28472 473 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms