RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 RNF103-CHMP3A0A140T963 221 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CXCL11O14625 94 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 LRIG2O94898 1065 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 ATE1O95260 518 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CPNE6O95741 557 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 HOXB8P17481 243 aaPredicted RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 C21orf59P57076 290 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 POU6F1Q14863 301 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 DALRD3Q5D0E6 543 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 ZNF678Q5SXM1 525 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CCNYL2Q5T2Q4 361 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 ZNF470Q6ECI4 717 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TAPT1Q6NXT6 567 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 RANBP10Q6VN20 620 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 RETREG3Q86VR2 466 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TBC1D21Q8IYX1 336 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SCML4Q8N228 414 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 MIER2Q8N344 545 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 DHRSXQ8N5I4 330 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 FICDQ9BVA6 458 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TRIM54Q9BYV2 358 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CHST12Q9NRB3 414 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 INTS10Q9NVR2 710 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 FADS3Q9Y5Q0 445 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 PDCD11Q14690 1871 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 A0A0J9YYE9 177 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 NEMP2A6NFY4 417 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 YJEFN3A6XGL0 299 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 H3BRB1 525 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 NFKBIEO00221 500 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 HOXD8P13378 290 aaPredicted RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 HDCP19113 662 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 KCNA5P22460 613 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SLC5A3P53794 718 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 LILRA4P59901 499 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 RAB39AQ14964 217 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 FAM117BQ6P1L5 589 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 BEND5Q7L4P6 421 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SPATA6LQ8N4H0 392 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CHPT1Q8WUD6 406 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SNRNP27Q8WVK2 155 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TRUB1Q8WWH5 349 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 PLEKHA8Q96JA3 519 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SEZ6LQ9BYH1 1024 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 MAGEE1Q9HCI5 957 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 TNFRSF12AQ9NP84 129 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SMPD3Q9NY59 655 aaPredicted RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 RBPJLQ9UBG7 517 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 BLOC1S6Q9UL45 172 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 CDC14AQ9UNH5 594 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 SH3BP1Q9Y3L3 701 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 HEMK1Q9Y5R4 338 aaPredicted RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
CAPN9-202ENST00000354537 COL4A4P53420 1690 aaPredicted RBP11.45□□□□□ -0.58
CAPN9-202ENST00000354537 ANGPT2O15123 496 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 FGF10O15520 208 aaPredicted RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 NCAM1P13591 858 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 GFAPP14136 432 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 VARSP26640 1264 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 HOXC13P31276 330 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 PGGT1BP53609 377 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 NAA20P61599 178 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 KCNC4Q03721 635 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 PMS2P3Q13401 168 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 AASDHQ4L235 1098 aaPredicted RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 TIGD7Q6NT04 549 aaPredicted RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 LAYNQ6UX15 382 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 CMTR2Q8IYT2 770 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 IPMKQ8NFU5 416 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 C1orf50Q9BV19 199 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 TRIM62Q9BVG3 475 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 PAIP1Q9H074 479 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 TKTL2Q9H0I9 626 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 AKTIPQ9H8T0 292 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 SEPT3Q9UH03 358 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 SBF1O95248 1867 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 CCDC78A2IDD5 438 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 CLDN5O00501 218 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 UBFD1O14562 309 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 GPR32O75388 356 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 GNAO1P09471 354 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 ALDOCP09972 364 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 SLC6A2P23975 617 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 RFC2P35250 354 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 MAP3K7CLP57077 242 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 HERVK_113P63132 956 aa11.44□□□□□ -0.58
CAPN9-202ENST00000354537 ADARB1P78563 741 aaKnown RBP11.44□□□□□ -0.58
CAPN9-202ENST00000354537 CBX2Q14781 532 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms