RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 C5orf42Q9H799 3197 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 A0A0U1RQS6 177 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 CCDC162PA2VCL2 907 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 GABRB3P28472 473 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 GDI1P31150 447 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 ST8SIA6P61647 398 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 PTPRNQ16849 979 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 ZC3HC1Q86WB0 502 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 FRS2Q8WU20 508 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 MCMBPQ9BTE3 642 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 CPEB1Q9BZB8 566 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 IQCGQ9H095 443 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 C12orf65Q9H3J6 166 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 RABEP2Q9H5N1 569 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 FBXO6Q9NRD1 293 aaPredicted RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 POLR3BQ9NW08 1133 aaPredicted RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 TMEM265A0A087WTH1 108 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 PRRT4C9JH25 899 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 TYK2P29597 1187 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 SERPINB8P50452 374 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 NEK3P51956 506 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 WDR4P57081 412 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 GRM3Q14832 879 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 ZSWIM9Q86XI8 627 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 OR2A12Q8NGT7 310 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 CDKN2AIPNLQ96HQ2 116 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 RPP25Q9BUL9 199 aaKnown RBP20.59■□□□□ 0.89
TRIM4-202ENST00000354241 GPR63Q9BZJ6 419 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 SUV39H2Q9H5I1 410 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 MAGEE1Q9HCI5 957 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 SLC17A7Q9P2U7 560 aa20.59■□□□□ 0.89
TRIM4-202ENST00000354241 TM9SF1O15321 606 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 UGT2B4P06133 528 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 CD151P48509 253 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 HHATQ5VTY9 493 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 NAIF1Q69YI7 327 aaPredicted RBP20.58■□□□□ 0.88
TRIM4-202ENST00000354241 LVRNQ6Q4G3 990 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 KIAA0408Q6ZU52 694 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 CMC1Q7Z7K0 106 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 TTC30BQ8N4P2 665 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 SMRP1Q8NCR6 262 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 GRIN3AQ8TCU5 1115 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 ACMSDQ8TDX5 336 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 VOPP1Q96AW1 172 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 FAM161BQ96MY7 647 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 SRPK1Q96SB4 655 aaKnown RBP20.58■□□□□ 0.88
TRIM4-202ENST00000354241 CAB39LQ9H9S4 337 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 BPIFA1Q9NP55 256 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 SNX15Q9NRS6 342 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 MARCH4Q9P2E8 410 aaPredicted RBP20.58■□□□□ 0.88
TRIM4-202ENST00000354241 PLA2G4CQ9UP65 541 aa20.58■□□□□ 0.88
TRIM4-202ENST00000354241 A0A0J9YYE9 177 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 STX7O15400 261 aaKnown RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ECI2O75521 394 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 HAUS5O94927 633 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 TRBC1P01850 177 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 GJA4P35212 333 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 SEC24CP53992 1094 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 LYSMD3Q7Z3D4 306 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 LDB1Q86U70 411 aaPredicted RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 CILP2Q8IUL8 1156 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ZNF366Q8N895 744 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ACVR1CQ8NER5 493 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 GPR22Q99680 433 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 TRMT61BQ9BVS5 477 aaKnown RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 MTG2Q9H4K7 406 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 CATSPERZQ9NTU4 200 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 SLC39A10Q9ULF5 831 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 WASH3PC4AMC7 463 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ASMTLO95671 621 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 POU3F3P20264 500 aaPredicted RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 SAT1P21673 171 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 VASPP50552 380 aaPredicted RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 IL9RQ01113 521 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 GDPD4Q6W3E5 623 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 CDHR3Q6ZTQ4 885 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 LMNTD2Q8IXW0 634 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 PNPLA1Q8N8W4 532 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 OR4L1Q8NH43 312 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 SPOCK2Q92563 424 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ZNF641Q96N77 438 aaPredicted RBP20.57■□□□□ 0.88
TRIM4-202ENST00000354241 NECTIN4Q96NY8 510 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 HEPHQ9BQS7 1158 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 ZMYND15Q9H091 742 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 EPN3Q9H201 632 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 MKS1Q9NXB0 559 aa20.57■□□□□ 0.88
TRIM4-202ENST00000354241 CD3EAPO15446 510 aaKnown RBP20.56■□□□□ 0.88
TRIM4-202ENST00000354241 HNF1BP35680 557 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 OPRD1P41143 372 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 CCT5P48643 541 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 RGS19P49795 217 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 PDE1CQ14123 709 aaPredicted RBP20.56■□□□□ 0.88
TRIM4-202ENST00000354241 COL19A1Q14993 1142 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 FNDC3BQ53EP0 1204 aaKnown RBP20.56■□□□□ 0.88
TRIM4-202ENST00000354241 PPM1JQ5JR12 505 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 CNSTQ6PJW8 725 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 AFTPHQ6ULP2 937 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 MTSS1LQ765P7 747 aa20.56■□□□□ 0.88
TRIM4-202ENST00000354241 TERB1Q8NA31 727 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms