RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SEC14L2O76054 403 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 INMTO95050 263 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 PARNO95453 639 aaKnown RBP7.66□□□□□ -1.18
BRCA1-201ENST00000352993 PRKCBP05771 671 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 PSMB9P28065 219 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 NMBRP28336 390 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 SHMT2P34897 504 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 CCT8P50990 548 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 MCCD1P59942 119 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-201ENST00000352993 VBP1P61758 197 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 PLIN5Q00G26 463 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 NFYCQ13952 458 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 MEP1AQ16819 746 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF280DQ6N043 979 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 USP43Q70EL4 1123 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 PIWIL4Q7Z3Z4 852 aaKnown RBP7.66□□□□□ -1.18
BRCA1-201ENST00000352993 THAP5Q7Z6K1 395 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 LINC00523Q86TU6 105 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 ZBTB8OSQ8IWT0 167 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 CDAN1Q8IWY9 1227 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 AQP12AQ8IXF9 295 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 CCDC185Q8N715 623 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 MINDY2Q8NBR6 621 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 LILRB4Q8NHJ6 448 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 XYLT2Q9H1B5 865 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 GPN2Q9H9Y4 310 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-201ENST00000352993 TRIM39Q9HCM9 518 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 HPS4Q9NQG7 708 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 ANKRD6Q9Y2G4 727 aa7.66□□□□□ -1.18
BRCA1-201ENST00000352993 A0A1W2PQ67 120 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CRCPO75575 148 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CDH1P12830 882 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 HTR1BP28222 390 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CDH13P55290 713 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CAPSQ13938 189 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 NCBP2-AS2Q69YL0 99 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 STYK1Q6J9G0 422 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PMF1Q6P1K2 205 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 ACOT1Q86TX2 421 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 ITIH5Q86UX2 942 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 GATAD2AQ86YP4 633 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 DENND6AQ8IWF6 608 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 SYTL1Q8IYJ3 562 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 LRRC71Q8N4P6 559 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TXNDC5Q8NBS9 432 aaKnown RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 STYXQ8WUJ0 223 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PTCD2Q8WV60 388 aaKnown RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 SLC45A3Q96JT2 553 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 DNAI2Q9GZS0 605 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PRELID1Q9Y255 219 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 MAGED1Q9Y5V3 778 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 LRRC37AA6NMS7 1700 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 FAM95CA0A1B0GW59 222 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CCRL2O00421 344 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 NDUFS2O75306 463 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 BMP4P12644 408 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 GJA9P57773 515 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 SLC6A3Q01959 620 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PPP1R8Q12972 351 aaKnown RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TUBA3CQ13748 450 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 RABL3Q5HYI8 236 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TBPL2Q6SJ96 375 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CLEC14AQ86T13 490 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 RETREG3Q86VR2 466 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TP53INP2Q8IXH6 220 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 LGI2Q8N0V4 545 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 SPARTQ8N0X7 666 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 RDM1Q8NG50 284 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 NDNFQ8TB73 568 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 VPS33AQ96AX1 596 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PSD2Q9BQI7 771 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 CHID1Q9BWS9 393 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 YTHDF1Q9BYJ9 559 aaKnown RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TRIT1Q9H3H1 467 aaKnown RBP7.65□□□□□ -1.18
BRCA1-201ENST00000352993 TMPRSS4Q9NRS4 437 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 PDE10AQ9Y233 779 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 SCN4AP35499 1836 aa7.65□□□□□ -1.18
BRCA1-201ENST00000352993 MDM4O15151 490 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 MGEA5O60502 916 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 FARP2O94887 1054 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 NFICP08651 508 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 GFAPP14136 432 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 ALOX12P18054 663 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 TGM1P22735 817 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 LEPRP48357 1165 aaKnown RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 BCAT1P54687 386 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 ILF2Q12905 390 aaKnown RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 SNX17Q15036 470 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 MAP1SQ66K74 1059 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 FAM45BPQ6NSW5 357 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 PSTKQ8IV42 348 aaKnown RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 ADGRG5Q8IZF4 528 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 SMG8Q8ND04 991 aaKnown RBP7.65□□□□□ -1.19
BRCA1-201ENST00000352993 PSD4Q8NDX1 1056 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 SUN5Q8TC36 379 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 FAM45AQ8TCE6 357 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 CLEC4CQ8WTT0 213 aa7.65□□□□□ -1.19
BRCA1-201ENST00000352993 OSCP1Q8WVF1 389 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms