RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ALDH2P05091 517 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 YBEYP58557 167 aaPredicted RBP15.48■□□□□ 0.07
UPF3B-202ENST00000345865 CLEC6AQ6EIG7 209 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 FUT10Q6P4F1 479 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 PRSS55Q6UWB4 352 aaPredicted RBP15.48■□□□□ 0.07
UPF3B-202ENST00000345865 ABI1Q8IZP0 508 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 PGAM4Q8N0Y7 254 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 OR7D4Q8NG98 312 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 BCL7CQ8WUZ0 217 aaPredicted RBP15.48■□□□□ 0.07
UPF3B-202ENST00000345865 FEM1CQ96JP0 617 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 MEAF6Q9HAF1 191 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 MOXD2PA6NHM9 499 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 HDCP19113 662 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 FDXRP22570 491 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 RGRP47804 291 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 MAPKAPK2P49137 400 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 AQP4P55087 323 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 SATB1Q01826 763 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 LHX8Q68G74 356 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 LRRC8DQ7L1W4 858 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 SETD3Q86TU7 594 aaPredicted RBP15.48■□□□□ 0.07
UPF3B-202ENST00000345865 SNX31Q8N9S9 440 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 CCDC126Q96EE4 140 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 IFT43Q96FT9 208 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 SMIM14Q96QK8 99 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 ZDHHC7Q9NXF8 308 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 VPS28Q9UK41 221 aa15.48■□□□□ 0.07
UPF3B-202ENST00000345865 CD3EAPO15446 510 aaKnown RBP15.47■□□□□ 0.07
UPF3B-202ENST00000345865 RNASEH1O60930 286 aaKnown RBP15.47■□□□□ 0.07
UPF3B-202ENST00000345865 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
UPF3B-202ENST00000345865 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
UPF3B-202ENST00000345865 IMPDH1P20839 514 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 ZNF235Q14590 738 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 ZNF678Q5SXM1 525 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 TRIB3Q96RU7 358 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 EFCAB1Q9HAE3 211 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 STARD7Q9NQZ5 370 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 SRRDQ9UH36 339 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
UPF3B-202ENST00000345865 MAGEA13PA6NCF6 341 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SLC38A8A6NNN8 435 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 PPP6CO00743 305 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 CASQ2O14958 399 aaPredicted RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 AOC2O75106 756 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 GJB5O95377 273 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 GLP2RO95838 553 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 MT-CO1P00395 513 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 FGF1P05230 155 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 CD1DP15813 335 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 HLA-DPA1P20036 260 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 ATXN3P54252 364 aaPredicted RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 RPS24P62847 133 aaKnown RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 TRIP10Q15642 601 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 GSTA3Q16772 222 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 UNC50Q53HI1 259 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 FAM45BPQ6NSW5 357 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 FAM156AQ8NDB6 213 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 GABPB2Q8TAK5 448 aaPredicted RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 FAM45AQ8TCE6 357 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 BRSK1Q8TDC3 778 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 PPP1R12CQ9BZL4 782 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 KLHL4Q9C0H6 718 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SCOCQ9UIL1 159 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SPO11Q9Y5K1 396 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 ZFP37Q9Y6Q3 630 aaPredicted RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 LRRC14BA6NHZ5 514 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 F5H5T6 163 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 H3BMM5 538 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 H3BNC9 293 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SUPT7LO94864 414 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SNUPNO95149 360 aaKnown RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 LYNP07948 512 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 CDH13P55290 713 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 MRPS22P82650 360 aaKnown RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 ART3Q13508 389 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 C5orf22Q49AR2 442 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 RNF220Q5VTB9 566 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 ALG1LQ6GMV1 187 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 GPR150Q8NGU9 434 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 TMA16Q96EY4 203 aaKnown RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 EXOC2Q96KP1 924 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 C3orf30Q96M34 536 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 NR1H4Q96RI1 486 aaPredicted RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 TUBGCP5Q96RT8 1024 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 SERPINI1Q99574 410 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 EML4Q9HC35 981 aaKnown RBP15.46■□□□□ 0.07
UPF3B-202ENST00000345865 TRAF6Q9Y4K3 522 aa15.46■□□□□ 0.07
UPF3B-202ENST00000345865 ATP6AP2A0A1C7CYW4 349 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 FBP2O00757 339 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 TRPA1O75762 1119 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ATP6AP2O75787 350 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 RPP40O75818 363 aaKnown RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SIX3O95343 332 aaPredicted RBP15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ALDH1A1P00352 501 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 EPOP01588 193 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 GALTP07902 379 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 ZCCHC18P0CG32 403 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 COL6A1P12109 1028 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SELPP16109 830 aa15.45■□□□□ 0.06
UPF3B-202ENST00000345865 SLC26A3P40879 764 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms