RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FGFR1P11362 822 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 DDX53Q86TM3 631 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 GATAD2AQ86YP4 633 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 DCAKDQ8WVC6 231 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 B3GALT6Q96L58 329 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 PRMT6Q96LA8 375 aaPredicted RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 PTBP2Q9UKA9 531 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 TBX4P57082 545 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 VPS26BQ4G0F5 336 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 RBM48Q5RL73 367 aaKnown RBP18.11■□□□□ 0.49
SMC4-201ENST00000344722 TOP1MTQ969P6 601 aa18.11■□□□□ 0.49
SMC4-201ENST00000344722 GUCY1B2O75343 617 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 LRCH4O75427 683 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 BNIP3Q12983 259 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 PLD5Q8N7P1 536 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 PHF10Q8WUB8 498 aaKnown RBP18.1■□□□□ 0.49
SMC4-201ENST00000344722 GATA5Q9BWX5 397 aaPredicted RBP18.1■□□□□ 0.49
SMC4-201ENST00000344722 DHX15O43143 795 aaKnown RBP18.1■□□□□ 0.49
SMC4-201ENST00000344722 HNF4AP41235 474 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 SMIM11AP58511 58 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 SLC26A9Q7LBE3 791 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 IZUMO1Q8IYV9 350 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 MTFMTQ96DP5 389 aaKnown RBP18.1■□□□□ 0.49
SMC4-201ENST00000344722 GRK4P32298 578 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
SMC4-201ENST00000344722 PFDN2Q9UHV9 154 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 PRELID1Q9Y255 219 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 NPHS1O60500 1241 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 UGT2B4P06133 528 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 AKAP5P24588 427 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 OR1G1P47890 313 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 SPIBQ01892 262 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 GPR180Q86V85 440 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 FAM156AQ8NDB6 213 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 CD101Q93033 1021 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 OR52E6Q96RD3 313 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 CMTM6Q9NX76 183 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.1■□□□□ 0.493e-7■■□□□ 12.9
SMC4-201ENST00000344722 ZNF224Q9NZL3 707 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 PTGFRNQ9P2B2 879 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 IGSF9Q9P2J2 1179 aa18.1■□□□□ 0.49
SMC4-201ENST00000344722 AQP12BA6NM10 295 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 GCATO75600 419 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 TIE1P35590 1138 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 MPP1Q00013 466 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 PTPN20Q4JDL3 420 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SCIMPQ6UWF3 145 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 PTCHD4Q6ZW05 846 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 AQP12AQ8IXF9 295 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 MICALL2Q8IY33 904 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 OR8H1Q8NGG4 311 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 OR52K2Q8NGK3 314 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 TMEM9Q9P0T7 183 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 UBIAD1Q9Y5Z9 338 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 TLL2Q9Y6L7 1015 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 CBX4O00257 560 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 OR1E1P30953 314 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SDC2P34741 201 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 BACE1P56817 501 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SIM2Q14190 667 aaPredicted RBP18.09■□□□□ 0.49
SMC4-201ENST00000344722 DLG2Q15700 870 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 OGFOD2Q6N063 350 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 MLPHQ9BV36 600 aaPredicted RBP18.09■□□□□ 0.49
SMC4-201ENST00000344722 ELP3Q9H9T3 547 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 A0A1W2PQ72 361 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 THP07101 528 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 NR2F6P10588 404 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 PTGS2P35354 604 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 LCN1P1Q5VSP4 162 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 AFTPHQ6ULP2 937 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 GALNT5Q7Z7M9 940 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 XYLT1Q86Y38 959 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 IKZF4Q9H2S9 585 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 ANGPT4Q9Y264 503 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SPEF1Q9Y4P9 236 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 NOTOA8MTQ0 251 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 M0QX08 132 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 LYPLA2O95372 231 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 PABPC4LP0CB38 370 aaKnown RBP18.09■□□□□ 0.49
SMC4-201ENST00000344722 CDH13P55290 713 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SLC27A1Q6PCB7 646 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 USP43Q70EL4 1123 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 ZFP14Q9HCL3 533 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
SMC4-201ENST00000344722 U3KQV3 271 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SLIT3O75094 1523 aa18.09■□□□□ 0.49
SMC4-201ENST00000344722 SUV39H1O43463 412 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 EPB42P16452 691 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 ERCC2P18074 760 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 OR2B6P58173 313 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 CRY1Q16526 586 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 LRRC20Q8TCA0 184 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 PIDD1Q9HB75 910 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 IRGMA1A4Y4 181 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 ANXA5P08758 320 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 PSMD4P55036 377 aaKnown RBP18.08■□□□□ 0.49
SMC4-201ENST00000344722 PUDPQ08623 228 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 FCGR1BQ92637 280 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms