RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LRRC14BA6NHZ5 514 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 OR6C75A6NL08 312 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 DRGXA6NNA5 263 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 F5H5T6 163 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 CD3EAPO15446 510 aaKnown RBP14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PRAMEF11O60813 436 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 LYNP07948 512 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 OR52E8Q6IFG1 317 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PGAM4Q8N0Y7 254 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 DBF4BQ8NFT6 615 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 CCDC126Q96EE4 140 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 MAELQ96JY0 434 aaKnown RBP14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 STARD7Q9NQZ5 370 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 MARCH5Q9NX47 278 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 IL37Q9NZH6 218 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PCDHB7Q9Y5E2 793 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 UBA6A0AVT1 1052 aaPredicted RBP14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 CCDC189A1A4V9 331 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM92AA1XBS5 289 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PMLP29590 882 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC6A4P31645 630 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 MMEL1Q495T6 779 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 AGKQ53H12 422 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 FBXO48Q5FWF7 155 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 FUT10Q6P4F1 479 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 ISCA2Q86U28 154 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 AFAP1L2Q8N4X5 818 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PPP2R3CQ969Q6 453 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 GSTO2Q9H4Y5 243 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 TMEM161AQ9NX61 479 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 PLXNA3P51805 1871 aa14.92□□□□□ -0.02
VIPAS39-202ENST00000343765 A0A1W2PQ45 241 aaPredicted RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 A0A1W2PQY0 241 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 UBDO15205 165 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC22A2O15244 555 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 KIF1CO43896 1103 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 GPC4O75487 556 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 SIX3O95343 332 aaPredicted RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 IGLV3-27P01718 113 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 ALDH2P05091 517 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 RPL17P18621 184 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 RPS24P62847 133 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 MRPL58Q14197 206 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 GEN1Q17RS7 908 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 LAYNQ6UX15 382 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 VCX3BQ9H321 246 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FBRSL1Q9HCM7 1045 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 TRAF6Q9Y4K3 522 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FRMPD3Q5JV73 1810 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 CAPN8A6NHC0 703 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 PPP6CO00743 305 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 NME5P56597 212 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 PDAP1Q13442 181 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 PTK2BQ14289 1009 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FASTKQ14296 549 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 HERC3Q15034 1050 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 GSTA3Q16772 222 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM45BPQ6NSW5 357 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 LRRC8DQ7L1W4 858 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 PELI3Q8N2H9 469 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 OR9I1Q8NGQ6 314 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 HMGCLL1Q8TB92 370 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FAM45AQ8TCE6 357 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 FATE1Q969F0 183 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 TADA1Q96BN2 335 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 MRPL1Q9BYD6 325 aaKnown RBP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 PTGDR2Q9Y5Y4 395 aa14.91□□□□□ -0.02
VIPAS39-202ENST00000343765 UBXN8O00124 270 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SCAMP3O14828 347 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ADAM12O43184 909 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 AOC2O75106 756 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SERPINF2P08697 491 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ATF6P18850 670 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ME2P23368 584 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 RGRP47804 291 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SCNN1BP51168 640 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SP3Q02447 781 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC14A2Q15849 920 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ZNF678Q5SXM1 525 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ISLR2Q6UXK2 745 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC22A9Q8IVM8 553 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PQLC1Q8N2U9 271 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 PTGR2Q8N8N7 351 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 RMDN1Q96DB5 314 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ZNF512Q96ME7 567 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 COPS7BQ9H9Q2 264 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 CATSPERZQ9NTU4 200 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 GIMAP2Q9UG22 337 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ZFP37Q9Y6Q3 630 aaPredicted RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 THSD7BQ9C0I4 1608 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 SLC38A8A6NNN8 435 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 ENO4A6NNW6 628 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 NBNO60934 754 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 RPP40O75818 363 aaKnown RBP14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 FGF1P05230 155 aa14.9□□□□□ -0.02
VIPAS39-202ENST00000343765 HLA-DPA1P20036 260 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms