RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 USP45Q70EL2 814 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 PARS2Q7L3T8 475 aaKnown RBP18.81■□□□□ 0.6
CDHR4-201ENST00000343366 LINC00523Q86TU6 105 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 PROSER1Q86XN7 944 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 CACUL1Q86Y37 369 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 OR14C36Q8NHC7 312 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 FOXJ1Q92949 421 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 VOPP1Q96AW1 172 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 LRRC40Q9H9A6 602 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 KCTD5Q9NXV2 234 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 SMARCAL1Q9NZC9 954 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 PCDHB9Q9Y5E1 797 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 MRFAP1Q9Y605 127 aa18.81■□□□□ 0.6
CDHR4-201ENST00000343366 ACACAQ13085 2346 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.8■□□□□ 0.6
CDHR4-201ENST00000343366 SEMA4FO95754 770 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 NDST3O95803 873 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 PSMB4P28070 264 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 DPP6P42658 865 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 ADPRHP54922 357 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 CDK16Q00536 496 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 TRAF2Q12933 501 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 TRIM61Q5EBN2 209 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 NAPEPLDQ6IQ20 393 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 KIAA1161Q6NSJ0 714 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 SLC23A3Q6PIS1 610 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 RAVER1Q8IY67 606 aaKnown RBP18.8■□□□□ 0.6
CDHR4-201ENST00000343366 SCRN2Q96FV2 425 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 TOE1Q96GM8 510 aaKnown RBP18.8■□□□□ 0.6
CDHR4-201ENST00000343366 MBD1Q9UIS9 605 aaPredicted RBP18.8■□□□□ 0.6
CDHR4-201ENST00000343366 APC2O95996 2303 aa18.8■□□□□ 0.6
CDHR4-201ENST00000343366 FLNBO75369 2602 aaKnown RBP18.8■□□□□ 0.6
CDHR4-201ENST00000343366 LOC285095A0A1B0GVY8 99 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 TTC24A2A3L6 582 aaPredicted RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 ANKRD66B4E2M5 251 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 E7EVH7 732 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 PDE2AO00408 941 aaPredicted RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 NEMP1O14524 444 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 MT-CYBP00156 380 aaPredicted RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 KRT14P02533 472 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 TIMP2P16035 220 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 ENGP17813 658 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 PTGER3P43115 390 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 WNT3AP56704 352 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 SEMA5AQ13591 1074 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 PPP1R7Q15435 360 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 UAP1L1Q3KQV9 507 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 POM121L1PQ3SYA9 428 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 DNTTIP2Q5QJE6 756 aaKnown RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 TTC27Q6P3X3 843 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 KDELC1Q6UW63 502 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 LPCAT2Q7L5N7 544 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 CEP112Q8N8E3 955 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 SPATA22Q8NHS9 363 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 PIH1D2Q8WWB5 315 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 PIGKQ92643 395 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 DDX47Q9H0S4 455 aaKnown RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 EIF2B3Q9NR50 452 aaKnown RBP18.79■□□□□ 0.6
CDHR4-201ENST00000343366 CHKBQ9Y259 395 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 GPSM3Q9Y4H4 160 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 FADS3Q9Y5Q0 445 aa18.79■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3DA0A087WVF3 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3IA0A087WXS9 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3EA0A087X179 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3KA0A087X1G2 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 SPAARA0A1B0GVQ0 90 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3FA6NER0 549 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3LB9A6J9 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 RIOK3O14730 519 aaKnown RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 AREL1O15033 823 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 PMPCBO75439 489 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 GJB3O75712 270 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 FGF1P05230 155 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3HP0C7X1 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 ZNF30P17039 623 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 RPL22P35268 128 aaKnown RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 DHPSP49366 369 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 CCR5P51681 352 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 FAM193AP78312 1265 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 DR1Q01658 176 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 RPL6Q02878 288 aaKnown RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 SOWAHCQ53LP3 525 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 SYCP2LQ5T4T6 812 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3GQ6DHY5 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3CQ6IPX1 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 RAB44Q7Z6P3 723 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 PCGF5Q86SE9 256 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TRIM69Q86WT6 500 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 SYT12Q8IV01 421 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TBC1D3Q8IZP1 549 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 FRMD1Q8N878 549 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 OXNAD1Q96HP4 312 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 MRGPRX2Q96LB1 330 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 MCCC1Q96RQ3 725 aaPredicted RBP18.78■□□□□ 0.6
CDHR4-201ENST00000343366 TRIB3Q96RU7 358 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 LYSMD1Q96S90 227 aa18.78■□□□□ 0.6
CDHR4-201ENST00000343366 MLPHQ9BV36 600 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms