RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 H3BQF6 201 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 AP3B1O00203 1094 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SYNCRIPO60506 623 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SPAG6O75602 509 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 NDST3O95803 873 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SYF2O95926 243 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GSRP00390 522 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ASLP04424 464 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FGF1P05230 155 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SRPRAP08240 638 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GSTA2P09210 222 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PGAM1P18669 254 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 HLA-DPA1P20036 260 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PHBP35232 272 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 IL12RB1P42701 662 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CSNK1DP48730 415 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 EIF3BP55884 814 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 AP1S1P61966 158 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SNRPD1P62314 119 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 IFFO1Q0D2I5 559 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ZNF234Q14588 700 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 STAT4Q14765 748 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 POU6F1Q14863 301 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 DLG2Q15700 870 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PTPRNQ16849 979 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 LONRF1Q17RB8 773 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 USP39Q53GS9 565 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 LAIR1Q6GTX8 287 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CES3Q6UWW8 571 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 C3orf62Q6ZUJ4 267 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CEP68Q76N32 757 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ALYREFQ86V81 257 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PCDH20Q8N6Y1 951 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 KDM1BQ8NB78 822 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 OR2AP1Q8NGE2 309 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GSDMBQ8TAX9 411 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FBF1Q8TES7 1133 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 HMGB4Q8WW32 186 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ISG20Q96AZ6 181 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ZNF669Q96BR6 464 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 MYO19Q96H55 970 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SPACA7Q96KW9 195 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CEP44Q9C0F1 390 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 IL22Q9GZX6 179 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ACSS3Q9H6R3 686 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CD248Q9HCU0 757 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FAM53CQ9NYF3 392 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 BCCIPQ9P287 314 aaKnown RBP eCLIP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 RABGEF1Q9UJ41 708 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 RAI2Q9Y5P3 530 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CFAP54Q96N23 3096 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PLXND1Q9Y4D7 1925 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PTPRZ1P23471 2315 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FAM237BA0A1B0GVD1 139 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 EXOC1LA0A1B0GW35 172 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 TCRBV9S1A1TA0A576 114 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CCDC78A2IDD5 438 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SMIM23A6NLE4 172 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 TTC34A8MYJ7 566 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 BNIP3LO60238 219 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 OPA1O60313 960 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PIGNO95427 931 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PRLP01236 227 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 EPOP01588 193 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 C1QAP02745 245 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PRKCGP05129 697 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PDHA1P08559 390 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GABRG2P18507 467 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 NMBRP28336 390 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GCAP28676 217 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 GKP32189 559 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 STX2P32856 288 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 WASP42768 502 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SLCO1A2P46721 670 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CCNHP51946 323 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SRSF5Q13243 272 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SEPT6Q14141 434 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CRYMQ14894 314 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 KRT71Q3SY84 523 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ACCSLQ4AC99 568 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FNDC3BQ53EP0 1204 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CARD16Q5EG05 197 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PCID2Q5JVF3 399 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 SPANXN3Q5MJ09 141 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 KIAA1211LQ6NV74 962 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 TRMT10BQ6PF06 316 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PRR23BQ6ZRT6 265 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 Q6ZVU0 165 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 CCNJLQ8IV13 435 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PGBD3Q8N328 593 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 RYBPQ8N488 228 aaPredicted RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 PPHLN1Q8NEY8 458 aaKnown RBP8.73□□□□□ -1.01
NLRC4-201ENST00000342905 LPCAT1Q8NF37 534 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FRS2Q8WU20 508 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 VOPP1Q96AW1 172 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 ARL8AQ96BM9 186 aa8.73□□□□□ -1.01
NLRC4-201ENST00000342905 FCRL3Q96P31 734 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms