RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 TK2O00142 265 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 PIRO00625 290 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 FBP2O00757 339 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CLOCKO15516 846 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ENDOD1O94919 500 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 LDLRP01130 860 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 HNRNPLP14866 589 aaKnown RBP eCLIP11.76□□□□□ -0.531e-12■■■■■ 40.4
TRAK1-202ENST00000341421 CCNIQ14094 377 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 GRM2Q14416 872 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ZNF792Q3KQV3 632 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 STK40Q8N2I9 435 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 LPPQ93052 612 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 OSBPL2Q9H1P3 480 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 LIN28AQ9H9Z2 209 aaKnown RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CASS4Q9NQ75 786 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CRLS1Q9UJA2 301 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 MYBPHLA2RUH7 354 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 M0R3G1 203 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 DNAJA2O60884 412 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CYBBP04839 570 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ITGALP20701 1170 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 MRPS15P82914 257 aaKnown RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 MAD2L1Q13257 205 aaPredicted RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 FUT11Q495W5 492 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CDHR3Q6ZTQ4 885 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 GLT6D1Q7Z4J2 308 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ARFGAP1Q8N6T3 406 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 DACH2Q96NX9 599 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 KCNK13Q9HB14 408 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 KIF17Q9P2E2 1029 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 NRP2O60462 931 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 MLYCDO95822 493 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 EDN1P05305 212 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 FGFR1P11362 822 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 RHOQP17081 205 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ITGAXP20702 1163 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 HOXD12P35452 270 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 PCLAFQ15004 111 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ZNF829Q3KNS6 432 aaPredicted RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 OGFRL1Q5TC84 451 aaPredicted RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ADCK1Q86TW2 530 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 TMEM126BQ8IUX1 230 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 ELMOD1Q8N336 334 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 HOPXQ9BPY8 73 aaPredicted RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 THUMPD3Q9BV44 507 aaKnown RBP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAK1-202ENST00000341421 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
TRAK1-202ENST00000341421 NCF1BA6NI72 391 aaPredicted RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 NCF1CA8MVU1 366 aaPredicted RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 H0Y626 953 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ZNF197O14709 1029 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 INPP4BO15327 924 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ALDH2P05091 517 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 TFAP2AP05549 437 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 SPATA31D3P0C874 917 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 NCF1P14598 390 aaPredicted RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ACAP2Q15057 778 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 PFKFB4Q16877 469 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 CXCL17Q6UXB2 119 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 SPATA31D4Q6ZUB0 917 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 SZRD1Q7Z422 152 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 HM13Q8TCT9 377 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 HDAC10Q969S8 669 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 RUBCNLQ9H714 662 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 AZIN1O14977 448 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 CCNA2P20248 432 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 NNMTP40261 264 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 NUMBP49757 651 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 BCAP31P51572 246 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 GALNT2Q10471 571 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 BORAQ6PGQ7 559 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 AFTPHQ6ULP2 937 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ITPKCQ96DU7 683 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 SEMA3CQ99985 751 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 RHOBTB2Q9BYZ6 727 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 ATP13A1Q9HD20 1204 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 C8orf4Q9NR00 106 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 DDX28Q9NUL7 540 aaKnown RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 AP3M1Q9Y2T2 418 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 FAM189A1O60320 539 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 FGF3P11487 239 aaPredicted RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 MSX2P35548 267 aaPredicted RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 CLCNKBP51801 687 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 NR6A1Q15406 480 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 FAM98BQ52LJ0 330 aaKnown RBP11.75□□□□□ -0.53
TRAK1-202ENST00000341421 HECTD2Q5U5R9 776 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 TXNDC11Q6PKC3 985 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 LGI2Q8N0V4 545 aa11.75□□□□□ -0.53
TRAK1-202ENST00000341421 LPCAT1Q8NF37 534 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms