RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 C1orf74Q96LT6 269 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 TUBGCP5Q96RT8 1024 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 KLHL4Q9C0H6 718 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 ZBTB26Q9HCK0 441 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 SLC27A5Q9Y2P5 690 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 KCTD3Q9Y597 815 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 ADAM12O43184 909 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 NPHS1O60500 1241 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 RNASEH1O60930 286 aaKnown RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 SOD2P04179 222 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 XRCC1P18887 633 aaPredicted RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 DPP6P42658 865 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 ARSDP51689 593 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 HTRA4P83105 476 aaPredicted RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 MSLNQ13421 630 aaPredicted RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 FAM83EQ2M2I3 478 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 RNF19BQ6ZMZ0 732 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 ZNF683Q8IZ20 524 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 UMODL1-AS1Q8N2C9 162 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 SH3RF2Q8TEC5 729 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 PDCD6IPQ8WUM4 868 aaKnown RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 TMA16Q96EY4 203 aaKnown RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 UXTQ9UBK9 157 aaPredicted RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 STK39Q9UEW8 545 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 INSL6Q9Y581 213 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 SLC4A7Q9Y6M7 1214 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 A8MT66 165 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 SDHDO14521 159 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 TSPAN8P19075 237 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 DNAJB1P25685 340 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 PTPRCAPQ14761 206 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 GSTA3Q16772 222 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 GRAMD1BQ3KR37 738 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 HECTD2Q5U5R9 776 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 GK5Q6ZS86 529 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 PIWIL4Q7Z3Z4 852 aaKnown RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 FIBCD1Q8N539 461 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 HERVK_113Q902F9 699 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 PPP2R3CQ969Q6 453 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 HDAC10Q969S8 669 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 MARCH4Q9P2E8 410 aaPredicted RBP16.37■□□□□ 0.21
LITAF-201ENST00000339430 MTRRQ9UBK8 725 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 CRYL1Q9Y2S2 319 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 PLXNA3P51805 1871 aa16.37■□□□□ 0.21
LITAF-201ENST00000339430 MTMR11A4FU01 709 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 ENO4A6NNW6 628 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 RHOQP17081 205 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 OR1D2P34982 312 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 LEPRP48357 1165 aaKnown RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 KPNA2P52292 529 aaKnown RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 NDST2P52849 883 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 NRG1Q02297 640 aaPredicted RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 SULT2A1Q06520 285 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 ART3Q13508 389 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SIRPB2Q5JXA9 342 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 FBXL22Q6P050 247 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 PIM3Q86V86 326 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 HERC6Q8IVU3 1022 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 PGBD5Q8N414 524 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SNX31Q8N9S9 440 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 NR1H4Q96RI1 486 aaPredicted RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 CRISPLD1Q9H336 500 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 WDR41Q9HAD4 459 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 ARNT2Q9HBZ2 717 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 ATP13A1Q9HD20 1204 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 PRPF19Q9UMS4 504 aaKnown RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 VNN2O95498 520 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SLC4A1P02730 911 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 LTA4HP09960 611 aaKnown RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 TCN1P20061 433 aaPredicted RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 CDKN2DP55273 166 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 MRPS22P82650 360 aaKnown RBP16.36■□□□□ 0.21
LITAF-201ENST00000339430 CEACAM7Q14002 265 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 FLOT2Q14254 428 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 ZNF423Q2M1K9 1284 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 AGAP9Q5VTM2 703 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SLC8B1Q6J4K2 584 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 KIAA0408Q6ZU52 694 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 CILP2Q8IUL8 1156 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 LRRC49Q8IUZ0 686 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 FAM156AQ8NDB6 213 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 CALML6Q8TD86 181 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SERPINI1Q99574 410 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 TMEM248Q9NWD8 314 aa16.36■□□□□ 0.21
LITAF-201ENST00000339430 SMIM24O75264 130 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MT-CO1P00395 513 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 CLCN5P51795 746 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 DNAJB13P59910 316 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PRAMEP78395 509 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PFKPQ01813 784 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PPP1R3AQ16821 1122 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 PIGGQ5H8A4 983 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 GPR158Q5T848 1215 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 FOXB2Q5VYV0 432 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 TMEM207Q6UWW9 146 aa16.35■□□□□ 0.21
LITAF-201ENST00000339430 DDX53Q86TM3 631 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms