RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SORT1Q99523 831 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 MFSD1Q9H3U5 465 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 OXSMQ9NWU1 459 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 ARMCX1Q9P291 453 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 TBC1D30Q9Y2I9 924 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.13□□□□□ -0.63
LRP1-202ENST00000338962 ACTL7AQ9Y615 435 aa11.13□□□□□ -0.63
LRP1-202ENST00000338962 CHD5Q8TDI0 1954 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 A0A087X1B8 175 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 TYW5A2RUC4 315 aaKnown RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 TMEM114B3SHH9 223 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 XYLBO75191 536 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 NDST3O95803 873 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 ESRRAP11474 423 aaPredicted RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 ARRB2P32121 409 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 SCNN1BP51168 640 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 CLCN5P51795 746 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 PABPC1LQ4VXU2 614 aaKnown RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 FAM91A1Q658Y4 838 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 LRRC8EQ6NSJ5 796 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 GALNT7Q86SF2 657 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 C12orf76Q8N812 135 aaPredicted RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 OR6Y1Q8NGX8 325 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 BRSK1Q8TDC3 778 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 TSPAN17Q96FV3 270 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 NSL1Q96IY1 281 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 NDNQ99608 321 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 OMDQ99983 421 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 EBF4Q9BQW3 602 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 TBC1D10AQ9BXI6 508 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 ARL8BQ9NVJ2 186 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 XPR1Q9UBH6 696 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 APOBEC2Q9Y235 224 aaKnown RBP11.12□□□□□ -0.63
LRP1-202ENST00000338962 ARL5AQ9Y689 179 aa11.12□□□□□ -0.63
LRP1-202ENST00000338962 TTC36A6NLP5 189 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 CCL22O00626 93 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 CCL16O15467 120 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 INSIG1O15503 277 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 KLHL2O95198 593 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SERPINA6P08185 405 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 PTPN2P17706 415 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 CCND1P24385 295 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ARSDP51689 593 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ALDH18A1P54886 795 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 SLC14A2Q15849 920 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 CFAP157Q5JU67 520 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 NAPRTQ6XQN6 538 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TMEM150AQ86TG1 271 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 LEMD2Q8NC56 503 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TTC16Q8NEE8 873 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 STYXQ8WUJ0 223 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 WBP2Q969T9 261 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 CYP2S1Q96SQ9 504 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 PNPOQ9NVS9 261 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 SH3BP1Q9Y3L3 701 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 H0Y626 953 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 LATS1O95835 1130 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 PIRTP0C851 137 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 PRKAA2P54646 552 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TBCCQ15814 346 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 FAM83EQ2M2I3 478 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ZNF789Q5FWF6 425 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TMC8Q8IU68 726 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SPATA6LQ8N4H0 392 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SMRP1Q8NCR6 262 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 UTP4Q969X6 686 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 NXNL1Q96CM4 212 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 TBATAQ96M53 351 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 TRIB3Q96RU7 358 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 MRPL46Q9H2W6 279 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.11□□□□□ -0.636e-7■■■□□ 17.7
LRP1-202ENST00000338962 NOP53Q9NZM5 478 aaKnown RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 STOML2Q9UJZ1 356 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
LRP1-202ENST00000338962 KCTD3Q9Y597 815 aa11.11□□□□□ -0.63
LRP1-202ENST00000338962 ATG2AQ2TAZ0 1938 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms