RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ATN1P54259 1190 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TCTN1Q2MV58 587 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 NHSL2Q5HYW2 709 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 SPANXN3Q5MJ09 141 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 ARHGAP36Q6ZRI8 547 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 STRA8Q7Z7C7 330 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 ZNF513Q8N8E2 541 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TOP1MTQ969P6 601 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 FCRL2Q96LA5 508 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 UHRF1Q96T88 793 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TUBA8Q9NY65 449 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 ADA2Q9NZK5 511 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 HCSTQ9UBK5 93 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 PCDHB7Q9Y5E2 793 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 PCDHGA7Q9Y5G6 932 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 PTPRDP23468 1912 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 LAMA2P24043 3122 aaKnown RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 F7P08709 466 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TFPTP0C1Z6 253 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 CCR1P32246 355 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 GRIA4P48058 902 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 ZNF135P52742 658 aaPredicted RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 GSTM4Q03013 218 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 RELAQ04206 551 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 PRKAA1Q13131 559 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 SPIDRQ14159 915 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TGFBIQ15582 683 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 KCTD21Q4G0X4 260 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 NXNQ6DKJ4 435 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 SCLYQ96I15 445 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 COX4I2Q96KJ9 171 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 CIB1Q99828 191 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 DCUN1D5Q9BTE7 237 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 PCDHAC1Q9H158 963 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TBC1D23Q9NUY8 699 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 SAGE1Q9NXZ1 904 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 UTP6Q9NYH9 597 aaKnown RBP18.85■□□□□ 0.61
PSPC1-201ENST00000338910 NLRC5Q86WI3 1866 aa18.85■□□□□ 0.61
PSPC1-201ENST00000338910 TMEM189-UBE2V1I3L0A0 370 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 MTSS1O43312 755 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 SERPINB7O75635 380 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 AP2A1O95782 977 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 ARPP19P56211 112 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 PSME3P61289 254 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 MTA1Q13330 715 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 PDCD4Q53EL6 469 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 VARS2Q5ST30 1063 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 LIPMQ5VYY2 423 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 BEND5Q7L4P6 421 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 DCP1BQ8IZD4 617 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 FAM47BQ8NA70 645 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 ATAD1Q8NBU5 361 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 ADAMTS16Q8TE57 1224 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 MLPHQ9BV36 600 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 ACE2Q9BYF1 805 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 SMOC2Q9H3U7 446 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HIPK3Q9H422 1215 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 PAK6Q9NQU5 681 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 VTI1BQ9UEU0 232 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 SNX13Q9Y5W8 968 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 CROCCQ5TZA2 2017 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 PSMD12O00232 456 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HMOX2P30519 316 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 ESRRGP62508 458 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HMBOX1Q6NT76 420 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 HERC6Q8IVU3 1022 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 TMEM151AQ8N4L1 468 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 TTC9BQ8N6N2 239 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 DUS3LQ96G46 650 aaKnown RBP18.84■□□□□ 0.61
PSPC1-201ENST00000338910 RNF208Q9H0X6 261 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 GBA3Q9H227 469 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 MID2Q9UJV3 735 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 TRHDEQ9UKU6 1024 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 CDC14AQ9UNH5 594 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 NEU3Q9UQ49 428 aa18.84■□□□□ 0.61
PSPC1-201ENST00000338910 SHROOM3Q8TF72 1996 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 A0A087WXM4 84 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 SLCO1B7G3V0H7 640 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 TPH1P17752 444 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 FUT4P22083 530 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 RPL10P27635 214 aaKnown RBP18.83■□□□□ 0.61
PSPC1-201ENST00000338910 GABRB3P28472 473 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 SLC7A1P30825 629 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 CCR3P51677 355 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 BRMS1LQ5PSV4 323 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 ZYG11AQ6WRX3 759 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 OTOP3Q7RTS5 596 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 TFAP2CQ92754 450 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 TEKT5Q96M29 485 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 CASD1Q96PB1 797 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 AGAP2Q99490 1192 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 IL22Q9GZX6 179 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 NDFIP2Q9NV92 336 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 VANGL2Q9ULK5 521 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 TANC1Q9C0D5 1861 aa18.83■□□□□ 0.61
PSPC1-201ENST00000338910 TCRBV3S1A0A5B6 114 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms