RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC9A6Q92581 669 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 COL26A1Q96A83 441 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RFT1Q96AA3 541 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PLA2G12BQ9BX93 195 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 A0A0A0MRY4 1105 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 AZIN1O14977 448 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 B3GAT3O94766 335 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SERPINA3P01011 423 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 BPGMP07738 259 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ANXA5P08758 320 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 HOXB8P17481 243 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 NPR2P20594 1047 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PSMA1P25786 263 aaKnown RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 MAGEA12P43365 314 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CLCN5P51795 746 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ARFIP1P53367 373 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SLC6A3Q01959 620 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PRKG2Q13237 762 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 RALGPS2Q86X27 583 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ASB12Q8WXK4 309 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 SPATA13Q96N96 652 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 NODALQ96S42 347 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 AASDHPPTQ9NRN7 309 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 XPR1Q9UBH6 696 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 MALT1Q9UDY8 824 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 ST3GAL5Q9UNP4 418 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 LRRC7Q96NW7 1537 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 NCANO14594 1321 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
COL4A6-201ENST00000334504 CHST10O43529 356 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 EGFRP00533 1210 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CCNB1P14635 433 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CCNYL2Q5T2Q4 361 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 XRRA1Q6P2D8 792 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 OAFQ86UD1 273 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 OR2T12Q8NG77 320 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DNAJC11Q9NVH1 559 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 H7C4K7 107 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PLOD2O00469 737 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SGTAO43765 313 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PRH1P02810 166 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ACADMP11310 421 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 BUD31P41223 144 aaPredicted RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 LHX1P48742 406 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TBX4P57082 545 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TAS2R41P59536 307 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 NRG1Q02297 640 aaPredicted RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PEX6Q13608 980 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 WDR59Q6PJI9 974 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GPR156Q8NFN8 814 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 LNX1Q8TBB1 728 aaPredicted RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 RAD51AP1Q96B01 352 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ACSS3Q9H6R3 686 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DNAJC28Q9NX36 388 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TEX46H3BTG2 121 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 MARCKSL1P49006 195 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DCDC1P59894 354 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SYCE2Q6PIF2 218 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 MOXD1Q6UVY6 613 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 QRFPRQ96P65 431 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ATP13A1Q9HD20 1204 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 MED11Q9P086 117 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SAMD4AQ9UPU9 718 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TMED5Q9Y3A6 229 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 KDM6BO15054 1643 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 FABP12A6NFH5 140 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ULK1O75385 1050 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GABBR2O75899 941 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 IFNA7P01567 189 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 RB1P06400 928 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ITGAVP06756 1048 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CBX5P45973 191 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ELP6Q0PNE2 266 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF234Q14588 700 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 REP15Q6BDI9 236 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GPR180Q86V85 440 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DENND6BQ8NEG7 585 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PMM1Q92871 262 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 GAL3ST3Q96A11 431 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SLC35C1Q96A29 364 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TP53INP1Q96A56 240 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 TEFMQ96QE5 360 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 RBAK-RBAKDNI3L0D1 243 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 SUPT20HL2P0C7V6 817 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CDH4P55283 916 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 AP3S2P59780 193 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 CD83Q01151 205 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 MYBPC3Q14896 1274 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 ACOX1Q15067 660 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PPM1LQ5SGD2 360 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 USP43Q70EL4 1123 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 DET1Q7L5Y6 550 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 PIWIL4Q7Z3Z4 852 aaKnown RBP9.82□□□□□ -0.84
COL4A6-201ENST00000334504 KCNK18Q7Z418 384 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 HELQQ8TDG4 1101 aa9.82□□□□□ -0.84
COL4A6-201ENST00000334504 LRRN4Q8WUT4 740 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms