RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ZFYVE19Q96K21 471 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 HAPLN3Q96S86 360 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 COMMD8Q9NX08 183 aa15.05■□□□□ -0
C9orf47-201ENST00000334490 OTCP00480 354 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 NTRK1P04629 796 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 NTSP30990 170 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 C2orf27AQ580R0 203 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 ATXN7L2Q5T6C5 722 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 KLHL32Q96NJ5 620 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 SDCBP2Q9H190 292 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 HSD3B7Q9H2F3 369 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 DTLQ9NZJ0 730 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 RABGEF1Q9UJ41 708 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 LRRC72A6NJI9 287 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 H3BM21 787 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 C2P06681 752 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 GUCA1AP43080 201 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 EML3Q32P44 896 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 PLA2G4EQ3MJ16 856 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 ATG16L2Q8NAA4 619 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 GPR156Q8NFN8 814 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 RERGQ96A58 199 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 MFSD3Q96ES6 412 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 TSC22D3Q99576 134 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 CD84Q9UIB8 345 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 TRBV23OR9-2A0A075B6M9 112 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 VGLL3A8MV65 326 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 SLC31A1O15431 190 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 PRAMEF1O95521 474 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 NUDT14O95848 222 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 CBX2Q14781 532 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 LDB1Q86U70 411 aaPredicted RBP15.04■□□□□ -0
C9orf47-201ENST00000334490 CKAP2Q8WWK9 683 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 USP7Q93009 1102 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 ATG13O75143 517 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 HNRNPLP14866 589 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf47-201ENST00000334490 GDI1P31150 447 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 NRIP1P48552 1158 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 NEK3P51956 506 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 ZBTB17Q13105 803 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 POF1BQ8WVV4 589 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 PHF21AQ96BD5 680 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 CLIP3Q96DZ5 547 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 PCDHB1Q9Y5F3 818 aa15.04■□□□□ -0
C9orf47-201ENST00000334490 IDSP22304 550 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 TRPC1P48995 793 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 TTMPQ5BVD1 217 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PRMT9Q6P2P2 845 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 FBXO46Q6PJ61 603 aaPredicted RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 TXNDC11Q6PKC3 985 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 VITQ6UXI7 678 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 CAMKK1Q8N5S9 505 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PLEKHO2Q8TD55 490 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 KRT84Q9NSB2 600 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 ATAD3AQ9NVI7 634 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 KCNK4Q9NYG8 393 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PRKAG3Q9UGI9 489 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 SIX4Q9UIU6 781 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 BTRCQ9Y297 605 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 GCATO75600 419 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 RPS7P62081 194 aaKnown RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 CHMP1BQ7LBR1 199 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 ZNF280BQ86YH2 543 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PTCD2Q8WV60 388 aaKnown RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 NTAN1Q96AB6 310 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 FAIM2Q9BWQ8 316 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 BCO2Q9BYV7 579 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PIGVQ9NUD9 493 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 KCTD5Q9NXV2 234 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 URADA6NGE7 173 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 SERPINI2O75830 405 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 CFHP08603 1231 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PABPC1P11940 636 aaKnown RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 MAT2AP31153 395 aaKnown RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 VHLP40337 213 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 NAA20P61599 178 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 TBCELQ5QJ74 424 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 KLHL35Q6PF15 583 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 FOXR1Q6PIV2 292 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 TBCDQ9BTW9 1192 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 LIMD1Q9UGP4 676 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 A0A1W2PPM1 405 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 MYADML2A6NDP7 307 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 OR2AG2A6NM03 316 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PFDN1O60925 122 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 GALTP07902 379 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 CSKP41240 450 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 KLC1Q07866 573 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 DPYSL2Q16555 572 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 FBXL22Q6P050 247 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 HFE2Q6ZVN8 426 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 PAGE2Q7Z2X7 111 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 CLP1Q92989 425 aaKnown RBP15.03■□□□□ -0
C9orf47-201ENST00000334490 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
C9orf47-201ENST00000334490 FAM237BA0A1B0GVD1 139 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 SOD2P04179 222 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 PCCBP05166 539 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms