RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SLC9A4Q6AI14 798 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 LINGO4Q6UY18 593 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 VPS36Q86VN1 386 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 MDM1Q8TC05 714 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 CSPG4P5Q96PW8 444 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 HERPUD2Q9BSE4 406 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 CINPQ9BW66 212 aaPredicted RBP6.4□□□□□ -1.39
USP16-201ENST00000334352 PCDH18Q9HCL0 1135 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 MBNL1Q9NR56 388 aaKnown RBP6.4□□□□□ -1.39
USP16-201ENST00000334352 FBXO8Q9NRD0 319 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 LATS2Q9NRM7 1088 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 TMPRSS4Q9NRS4 437 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 PHPT1Q9NRX4 125 aaPredicted RBP6.4□□□□□ -1.39
USP16-201ENST00000334352 FEZ2Q9UHY8 353 aaPredicted RBP6.4□□□□□ -1.39
USP16-201ENST00000334352 PNMA8BQ9ULN7 279 aaPredicted RBP6.4□□□□□ -1.39
USP16-201ENST00000334352 PCNX2A6NKB5 2137 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 DMXL1Q9Y485 3027 aa6.4□□□□□ -1.39
USP16-201ENST00000334352 WDFY4Q6ZS81 3184 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 FGF1P05230 155 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 UGT2B4P06133 528 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CEACAM5P06731 702 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KRT7P08729 469 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CCNB1P14635 433 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 MX2P20592 715 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TGM2P21980 687 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 RBMS1P29558 406 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 SLC1A1P43005 524 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 RPL7AP62424 266 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 GABREP78334 506 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KLHL40Q2TBA0 621 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 SPECC1LQ69YQ0 1117 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 ZSWIM9Q86XI8 627 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KCNE4Q8WWG9 221 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CATSPER2Q96P56 530 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CCDC3Q9BQI4 270 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 SPON2Q9BUD6 331 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CHRNA10Q9GZZ6 450 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 SARS2Q9NP81 518 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 STARD5Q9NSY2 213 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 EPHA6Q9UF33 1036 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 IPO11Q9UI26 975 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 TMEM184BQ9Y519 407 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.39□□□□□ -1.393e-6■■□□□ 13.1
USP16-201ENST00000334352 A0A0A6YYK5 440 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 KRIT1O00522 736 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 GCATO75600 419 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PROSCO94903 275 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 SOD1P00441 154 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 FTLP02792 175 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 NR2C2P49116 596 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 THOP1P52888 689 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 ADKP55263 362 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 ATP11AP98196 1134 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PPIDQ08752 370 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 RAB6CQ53S08 254 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 DCUN1D2Q6PH85 259 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PNPLA1Q8N8W4 532 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 NUS1Q96E22 293 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 OLFM3Q96PB7 478 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TAAR9Q96RI9 348 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TRIB3Q96RU7 358 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 RAB6CQ9H0N0 254 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 HAUS4Q9H6D7 363 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 FAM207AQ9NSI2 230 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 DNAJC28Q9NX36 388 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 GPR34Q9UPC5 381 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PCDHGA6Q9Y5G7 932 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 RAI2Q9Y5P3 530 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 DCHS1Q96JQ0 3298 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KIR2DS5A0A0G2JLQ3 304 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 A0A0G2JNG1 304 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 A0A0J9YYE9 177 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PRSS38A1L453 326 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 LRRC53A6NM62 1247 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KIR2DS3K7RE56 304 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CHUKO15111 745 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 SLC31A1O15431 190 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PAK4O96013 591 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 TRBC1P01850 177 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 XRCC1P18887 633 aaPredicted RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 ARL4AP40617 200 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 NOP2P46087 812 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 CLDN2P57739 230 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 TPM4P67936 248 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 IL9RQ01113 521 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 MC2RQ01718 297 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CFHR1Q03591 330 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KIR2DS5Q14953 304 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 CNGA3Q16281 694 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 HADHQ16836 314 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 FAXCQ5TGI0 409 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 RWDD4Q6NW29 188 aaKnown RBP6.39□□□□□ -1.39
USP16-201ENST00000334352 GUSBP11Q6P575 273 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 USP45Q70EL2 814 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PRSS42Q7Z5A4 293 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 PGBD5Q8N414 524 aa6.39□□□□□ -1.39
USP16-201ENST00000334352 KYQ8NBH2 561 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms