RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ERVK-6Q9BXR3 956 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 YIPF3Q9GZM5 350 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 MAGEH1Q9H213 219 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM161AQ9NX61 479 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 CACNA2D2Q9NY47 1150 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 TRAF6Q9Y4K3 522 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 PCDHGA7Q9Y5G6 932 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
CCDC172-201ENST00000333254 NEMP2A6NFY4 417 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 FAM155AB1AL88 458 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM233B4DJY2 109 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 F8W810 466 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PSMD12O00232 456 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TBC1D4O60343 1298 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 NDST3O95803 873 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 GLP2RO95838 553 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PABPC4LP0CB38 370 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 UBTFL6P0CB48 400 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CKBP12277 381 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ENO3P13929 434 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CD1DP15813 335 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ARSDP51689 593 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CHN2P52757 468 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ELAVL2Q12926 359 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TRIM25Q14258 630 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 FASTKQ14296 549 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 DDR2Q16832 855 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 USP41Q3LFD5 358 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 MMEL1Q495T6 779 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CTXN3Q4LDR2 81 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 UGT2A3Q6UWM9 527 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TFAP2DQ7Z6R9 452 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CLYBLQ8N0X4 340 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 GALNT15Q8N3T1 639 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 HMGCLL1Q8TB92 370 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TSPEARQ8WU66 669 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 DCUN1D1Q96GG9 259 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 LRGUKQ96M69 825 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TRIB3Q96RU7 358 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 UHRF1Q96T88 793 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 NDNQ99608 321 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 MGME1Q9BQP7 344 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 C1QTNF3Q9BXJ4 246 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SYTL2Q9HCH5 934 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM45AQ9NWC5 275 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TMCO1Q9UM00 188 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PADI4Q9UM07 663 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 GABRQQ9UN88 632 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ARIH1Q9Y4X5 557 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF106Q9H2Y7 1883 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SMIM31A0A1B0GVY4 71 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 KIF3CO14782 793 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CD3EAPO15446 510 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 VPS4BO75351 444 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SNRPB2P08579 225 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SERPINF2P08697 491 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 HNRNPLP14866 589 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF37AP17032 561 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CCNHP51946 323 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 STC1P52823 247 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PGGT1BP53609 377 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CDKN2DP55273 166 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 C1QTNF8P60827 252 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 MAXP61244 160 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ATP6V0D1P61421 351 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 MS4A2Q01362 244 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ITKQ08881 620 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 GRIK2Q13002 908 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF235Q14590 738 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PDK3Q15120 406 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 GRAMD1BQ3KR37 738 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 UGT3A2Q3SY77 523 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 LIN52Q52LA3 116 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 UNC50Q53HI1 259 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SAMD4BQ5PRF9 694 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 RNF220Q5VTB9 566 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 FOXB2Q5VYV0 432 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 RAP1GAP2Q684P5 730 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 REP15Q6BDI9 236 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PRMT9Q6P2P2 845 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM207Q6UWW9 146 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 PTAR1Q7Z6K3 402 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 RNF180Q86T96 592 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 BHLHE22Q8NFJ8 381 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 OR6P1Q8NGX9 317 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 OVCA2Q8WZ82 227 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 MOCOSQ96EN8 888 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 KLHL5Q96PQ7 755 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 FAM193BQ96PV7 902 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 SEMA3CQ99985 751 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TSEN34Q9BSV6 310 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 AARSD1Q9BTE6 412 aaKnown RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TRMT13Q9NUP7 481 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms