RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 MPP5Q8N3R9 675 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 FBXO5Q9UKT4 447 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 TFR2Q9UP52 801 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 SCAF8Q9UPN6 1271 aaKnown RBP13.35□□□□□ -0.27
TRAK1-201ENST00000327628 C1orf232A0A0U1RR37 186 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-201ENST00000327628 PROCP04070 461 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 ATP12AP54707 1039 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 PTPRNQ16849 979 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 ZNF513Q8N8E2 541 aaPredicted RBP13.35□□□□□ -0.27
TRAK1-201ENST00000327628 REXO4Q9GZR2 422 aaKnown RBP13.35□□□□□ -0.27
TRAK1-201ENST00000327628 THUMPD1Q9NXG2 353 aaKnown RBP13.35□□□□□ -0.27
TRAK1-201ENST00000327628 PCDHGC3Q9UN70 934 aa13.35□□□□□ -0.27
TRAK1-201ENST00000327628 UNCXA6NJT0 531 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 LRIG2O94898 1065 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CCNCP24863 283 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CDK9P50750 372 aaKnown RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 FMO1Q01740 532 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 GALNT3Q14435 633 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 STYXQ8WUJ0 223 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 GLOD4Q9HC38 313 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 IFT80Q9P2H3 777 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 KRT33AO76009 404 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ASLP04424 464 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ICAM3P32942 547 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 RPL5P46777 297 aaKnown RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CXCR3P49682 368 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ARFIP1P53367 373 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CDH8P55286 799 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 WFIKKN2Q8TEU8 576 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MPP4Q96JB8 637 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CMTM6Q9NX76 183 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MAP2K7O14733 419 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ELFN1P0C7U0 828 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 SLC6A2P23975 617 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 PFKPQ01813 784 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 IZUMO1Q8IYV9 350 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TRPV3Q8NET8 790 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 PLGRKTQ9HBL7 147 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 DNAJC11Q9NVH1 559 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 FAM198AQ9UFP1 575 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 VWA7Q9Y334 891 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 GPSM3Q9Y4H4 160 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MAGEB3O15480 346 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ADRB2P07550 413 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 PRKAR1AP10644 381 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ALOX12P18054 663 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 PKNOX1P55347 436 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 CNTN2Q02246 1040 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 NOMO1Q15155 1222 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 QPRTQ15274 297 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 TTC29Q8NA56 475 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 PDGFDQ9GZP0 370 aaPredicted RBP13.34□□□□□ -0.27
TRAK1-201ENST00000327628 FAM105AQ9NUU6 356 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 ING4Q9UNL4 249 aa13.34□□□□□ -0.27
TRAK1-201ENST00000327628 MEIS2O14770 477 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 DHX15O43143 795 aaKnown RBP13.33□□□□□ -0.27
TRAK1-201ENST00000327628 NDST2P52849 883 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.278e-7■■□□□ 11.8
TRAK1-201ENST00000327628 ZNF846Q147U1 533 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 TATDN1Q6P1N9 297 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 ADCY4Q8NFM4 1077 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 NUSAP1Q9BXS6 441 aaKnown RBP13.33□□□□□ -0.27
TRAK1-201ENST00000327628 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.27
TRAK1-201ENST00000327628 EIF2B3Q9NR50 452 aaKnown RBP13.33□□□□□ -0.27
TRAK1-201ENST00000327628 PTGFRNQ9P2B2 879 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 PHF11Q9UIL8 331 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 GRIN2DO15399 1336 aa13.33□□□□□ -0.27
TRAK1-201ENST00000327628 HAT1O14929 419 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 SLC22A3O75751 556 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 SPAM1P38567 509 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 CCNFP41002 786 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
TRAK1-201ENST00000327628 RGS21Q2M5E4 152 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 C9orf57Q5W0N0 161 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 FAM180AQ6UWF9 173 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 KIAA1324Q6UXG2 1013 aaKnown RBP13.33□□□□□ -0.28
TRAK1-201ENST00000327628 TTC7BQ86TV6 843 aa13.33□□□□□ -0.28
TRAK1-201ENST00000327628 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
TRAK1-201ENST00000327628 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
TRAK1-201ENST00000327628 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms