RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 CDX2Q99626 313 aaPredicted RBP31.39■■■□□ 2.62
NECTIN3-201ENST00000319792 C19orf43Q9BQ61 176 aa31.39■■■□□ 2.62
NECTIN3-201ENST00000319792 OSBPL1AQ9BXW6 950 aa31.39■■■□□ 2.62
NECTIN3-201ENST00000319792 TMEM245Q9H330 911 aa31.39■■■□□ 2.62
NECTIN3-201ENST00000319792 TRPV5Q9NQA5 729 aa31.39■■■□□ 2.62
NECTIN3-201ENST00000319792 TSPAN11A1L157 253 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 ITGA2BP08514 1039 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 CTPS1P17812 591 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 SPRP35270 261 aaPredicted RBP31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 LIMK2P53671 638 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 BMPR2Q13873 1038 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 ZNF234Q14588 700 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 PTPRCAPQ14761 206 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 CCDC85BQ15834 202 aaPredicted RBP31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 UGP2Q16851 508 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 HNRNPA1L2Q32P51 320 aaKnown RBP31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 GPR153Q6NV75 609 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 SH2D5Q6ZV89 423 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 SERAC1Q96JX3 654 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 TBATAQ96M53 351 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 SELENOSQ9BQE4 189 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 MTG2Q9H4K7 406 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 THAP10Q9P2Z0 257 aaPredicted RBP31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 IL36AQ9UHA7 158 aa31.39■■■□□ 2.61
NECTIN3-201ENST00000319792 EDDM13A0A1B0GTR0 161 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 BUD23O43709 281 aaKnown RBP31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 ALPIP09923 528 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 PTPRRQ15256 657 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 ZNF470Q6ECI4 717 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 BRAT1Q6PJG6 821 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 NUDT18Q6ZVK8 323 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 GALNT7Q86SF2 657 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 OR4K2Q8NGD2 314 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 ALKBH8Q96BT7 664 aaKnown RBP31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 CDKN2AIPNLQ96HQ2 116 aa31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 MCCC1Q96RQ3 725 aaPredicted RBP31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 POLR3BQ9NW08 1133 aaPredicted RBP31.38■■■□□ 2.61
NECTIN3-201ENST00000319792 CCL22O00626 93 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 PRPF4O43172 522 aaKnown RBP eCLIP31.37■■■□□ 2.618e-9■■■■■ 29.4
NECTIN3-201ENST00000319792 SLC1A2P43004 574 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 SLC18A1P54219 525 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 SLC18A2Q05940 514 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 CDKN3Q16667 212 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 MROH9Q5TGP6 573 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 NDUFAF2Q8N183 169 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 PLCD3Q8N3E9 789 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 PAF1Q8N7H5 531 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 GPR150Q8NGU9 434 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 GRIN3AQ8TCU5 1115 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 HCAR2Q8TDS4 363 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 FBXO5Q9UKT4 447 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 HCN2Q9UL51 889 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 SMG5Q9UPR3 1016 aaKnown RBP31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 STARD13Q9Y3M8 1113 aa31.37■■■□□ 2.61
NECTIN3-201ENST00000319792 TMEM120BA0PK00 339 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 CCDC162PA2VCL2 907 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 LEFTY1O75610 366 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 RFPL1O75677 317 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 CTSLP07711 333 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 KRT4P19013 534 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 HNF1BP35680 557 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 HMGCLP35914 325 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 SOX9P48436 509 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 LYSMD3Q7Z3D4 306 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 DENND6AQ8IWF6 608 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 C4orf33Q8N1A6 199 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 OR6P1Q8NGX9 317 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 ISL2Q96A47 359 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 SCRN2Q96FV2 425 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 SGSM3Q96HU1 749 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 KLHL32Q96NJ5 620 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 PHF7Q9BWX1 381 aaPredicted RBP31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 RHOJQ9H4E5 214 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 IL17CQ9P0M4 197 aa31.36■■■□□ 2.61
NECTIN3-201ENST00000319792 H7C0S8 307 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 GOT2P00505 430 aaKnown RBP31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 GABRB3P28472 473 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 CCNFP41002 786 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 TMPRSS15P98073 1019 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 C9orf64Q5T6V5 341 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 ZC3HC1Q86WB0 502 aaKnown RBP31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 ZNF366Q8N895 744 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 GPR63Q9BZJ6 419 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 DKK3Q9UBP4 350 aa31.35■■■□□ 2.61
NECTIN3-201ENST00000319792 STX7O15400 261 aaKnown RBP31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 TYROBPO43914 113 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 POLR2LP62875 67 aaKnown RBP31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 CTBP1Q13363 440 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 SKIV2LQ15477 1246 aaKnown RBP31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 ARSIQ5FYB1 569 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 AFTPHQ6ULP2 937 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 USP45Q70EL2 814 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 CILP2Q8IUL8 1156 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 BANPQ8N9N5 519 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 EID2BQ96D98 161 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 VPS39Q96JC1 886 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 P2RY13Q9BPV8 354 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 SUDS3Q9H7L9 328 aaPredicted RBP31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 KCNK12Q9HB15 430 aa31.34■■■□□ 2.61
NECTIN3-201ENST00000319792 CKAP5Q14008 2032 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms