RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 ME2P23368 584 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 ACVRL1P37023 503 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 LARP4Q71RC2 724 aaKnown RBP eCLIP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 GTSE1Q9NYZ3 720 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 PACSIN3Q9UKS6 424 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 NOD1Q9Y239 953 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 OR51F1A6NGY5 319 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 TRIM24O15164 1050 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 HOXD9P28356 352 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 ALDH1A3P47895 512 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 TAF10Q12962 218 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 FLOT2Q14254 428 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 UNC50Q53HI1 259 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 GPR158Q5T848 1215 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 FBXL19Q6PCT2 694 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 RSPO2Q6UXX9 243 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 GK5Q6ZS86 529 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 MGME1Q9BQP7 344 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 FAM192AQ9GZU8 254 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 ELAC1Q9H777 363 aaKnown RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 SUCOQ9UBS9 1254 aaKnown RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 PRG3Q9Y2Y8 225 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 CCL22O00626 93 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 DENRO43583 198 aaKnown RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 ARSAP15289 507 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 VCLP18206 1134 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 HERVK_113P63132 956 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 ITKQ08881 620 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 GPR17Q13304 367 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 TRIP10Q15642 601 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 HACD2Q6Y1H2 254 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 RPS27LQ71UM5 84 aaKnown RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 LDB1Q86U70 411 aaPredicted RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 PIM3Q86V86 326 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 HIPK4Q8NE63 616 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 RHEBL1Q8TAI7 183 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 TOP1MTQ969P6 601 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 ASB9Q96DX5 294 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 TBATAQ96M53 351 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 NPAS2Q99743 824 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 SEMA3CQ99985 751 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 TTLL2Q9BWV7 592 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 CACNA2D2Q9NY47 1150 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 RPP40O75818 363 aaKnown RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 SOAT2O75908 522 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 GOT2P00505 430 aaKnown RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 FESP07332 822 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 ZNF37AP17032 561 aaPredicted RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 PPP1R3AQ16821 1122 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 LILRA2Q8N149 483 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 DUS3LQ96G46 650 aaKnown RBP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.81□□□□□ -0.2
ATG4C-201ENST00000317868 MICAL3Q7RTP6 2002 aa13.81□□□□□ -0.2
ATG4C-201ENST00000317868 H3BNC9 293 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 STX16-NPEPL1H3BU86 382 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 TRIM38O00635 465 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 C8BP07358 591 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 FGF4P08620 206 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 ENO3P13929 434 aaPredicted RBP13.8□□□□□ -0.2
ATG4C-201ENST00000317868 MTHFD2P13995 350 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 TACR2P21452 398 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 PKNOX1P55347 436 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 PRAMEP78395 509 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 MAPRE2Q15555 327 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 UGT2A3Q6UWM9 527 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 MARVELD2Q8N4S9 558 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 AFAP1L2Q8N4X5 818 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 DNAJC1Q96KC8 554 aaKnown RBP13.8□□□□□ -0.2
ATG4C-201ENST00000317868 RPRD1AQ96P16 312 aaPredicted RBP13.8□□□□□ -0.2
ATG4C-201ENST00000317868 CASD1Q96PB1 797 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 ATOH8Q96SQ7 321 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 ALG9Q9H6U8 611 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 BCAP29Q9UHQ4 241 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 TRAF6Q9Y4K3 522 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 ARL5AQ9Y689 179 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
ATG4C-201ENST00000317868 CD3EAPO15446 510 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms