RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ADI1Q9BV57 179 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SLC39A8Q9C0K1 460 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 ARNT2Q9HBZ2 717 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 FBRSL1Q9HCM7 1045 aaKnown RBP19.16■□□□□ 0.66
RTN4-201ENST00000317610 CSNK1G1Q9HCP0 422 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 TBC1D13Q9NVG8 400 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 NDUFAF1Q9Y375 327 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SAC3D1A6NKF1 404 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 HTR7P34969 479 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SCNN1BP51168 640 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 CTBSQ01459 385 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 BNIP2Q12982 314 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 SEPT6Q14141 434 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 INPP5AQ14642 412 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 TBCELQ5QJ74 424 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 MANEALQ5VSG8 457 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 DUS1LQ6P1R4 473 aaKnown RBP19.16■□□□□ 0.66
RTN4-201ENST00000317610 MINDY1Q8N5J2 469 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 DQX1Q8TE96 717 aaKnown RBP19.16■□□□□ 0.66
RTN4-201ENST00000317610 FEM1CQ96JP0 617 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 C3orf30Q96M34 536 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 C8orf4Q9NR00 106 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 TBCCD1Q9NVR7 557 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 ZNF510Q9Y2H8 683 aa19.16■□□□□ 0.66
RTN4-201ENST00000317610 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
RTN4-201ENST00000317610 A0A0J9YYE9 177 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 DHRS12A0PJE2 317 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 SH3PXD2BA1X283 911 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 FGF10O15520 208 aaPredicted RBP19.15■□□□□ 0.66
RTN4-201ENST00000317610 GNAO1P09471 354 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 PLOD1Q02809 727 aaPredicted RBP19.15■□□□□ 0.66
RTN4-201ENST00000317610 TMED1Q13445 227 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 ATP6AP1Q15904 470 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 EML3Q32P44 896 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 SLC36A3Q495N2 470 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 UNC50Q53HI1 259 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 CLVS1Q8IUQ0 354 aaPredicted RBP19.15■□□□□ 0.66
RTN4-201ENST00000317610 GABPB2Q8TAK5 448 aaPredicted RBP19.15■□□□□ 0.66
RTN4-201ENST00000317610 RNF34Q969K3 372 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 SMARCD1Q96GM5 515 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 RBM22Q9NW64 420 aaKnown RBP eCLIP19.15■□□□□ 0.66
RTN4-201ENST00000317610 EBF1Q9UH73 591 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 CROCCQ5TZA2 2017 aa19.15■□□□□ 0.66
RTN4-201ENST00000317610 BAG6P46379 1132 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 STT3AP46977 705 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 PRAMEP78395 509 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 MERTKQ12866 999 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 SPATS1Q496A3 300 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 TIGD7Q6NT04 549 aaPredicted RBP19.14■□□□□ 0.66
RTN4-201ENST00000317610 TTC33Q6PID6 262 aaPredicted RBP19.14■□□□□ 0.66
RTN4-201ENST00000317610 KDELC1Q6UW63 502 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 SPRED1Q7Z699 444 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 SCML4Q8N228 414 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 HSPBAP1Q96EW2 488 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 AKTIPQ9H8T0 292 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 ATP13A1Q9HD20 1204 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 CDH9Q9ULB4 789 aa19.14■□□□□ 0.66
RTN4-201ENST00000317610 ATP6AP2A0A1C7CYW4 349 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 FXYD1O00168 92 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 ATP6AP2O75787 350 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 RPL10P27635 214 aaKnown RBP19.14■□□□□ 0.65
RTN4-201ENST00000317610 AFMIDQ63HM1 303 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 TMEM207Q6UWW9 146 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 Q6ZNX1 250 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 MOB2Q70IA6 237 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 BEND5Q7L4P6 421 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 ISCA2Q86U28 154 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 SLC15A3Q8IY34 581 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 CLYBLQ8N0X4 340 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 ZNF786Q8N393 782 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 DNAJB3Q8WWF6 145 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.14■□□□□ 0.656e-7■□□□□ 11.1
RTN4-201ENST00000317610 C12orf43Q96C57 262 aaKnown RBP19.14■□□□□ 0.65
RTN4-201ENST00000317610 LRCH3Q96II8 777 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 C9orf16Q9BUW7 83 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 ATXN3LQ9H3M9 355 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 HIPK3Q9H422 1215 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 FAIMQ9NVQ4 179 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 ACTR3BQ9P1U1 418 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 SFMBT1Q9UHJ3 866 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 FAF1Q9UNN5 650 aaPredicted RBP19.14■□□□□ 0.65
RTN4-201ENST00000317610 VWA7Q9Y334 891 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 BPTFQ12830 3046 aa19.14■□□□□ 0.65
RTN4-201ENST00000317610 MIA3Q5JRA6 1907 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ZSCAN9O15535 394 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 SUPT7LO94864 414 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 PAPSS2O95340 614 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 MT-CO1P00395 513 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 FGF4P08620 206 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 IL10P22301 178 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 KCNC1P48547 511 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 FAM219BQ5XKK7 198 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ZNF554Q86TJ5 538 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 CILP2Q8IUL8 1156 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ABTB1Q969K4 478 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 DCPSQ96C86 337 aaKnown RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 CENPNQ96H22 339 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 MYRFLQ96LU7 910 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 CYP2S1Q96SQ9 504 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms