RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 GK5Q6ZS86 529 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CMC1Q7Z7K0 106 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 PJA1Q8NG27 643 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TDRD1Q9BXT4 1180 aaKnown RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 RSPH9Q9H1X1 276 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TRIT1Q9H3H1 467 aaKnown RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 DSN1Q9H410 356 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 U3KQV3 271 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 IQCMA0A1B0GVH7 501 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 FAM25EA8MYX2 175 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 KPNA3O00505 521 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CYP3A4P08684 503 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ACADMP11310 421 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CRHR1P34998 444 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 FITM2Q8N6M3 262 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF655Q8N720 491 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 SUN5Q8TC36 379 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ALG3Q92685 438 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CLPTM1LQ96KA5 538 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 B3GALT6Q96L58 329 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF607Q96SK3 696 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 NKIRAS2Q9NYR9 191 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ST3GAL5Q9UNP4 418 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 PTPN1P18031 435 aaKnown RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 GTF2A2P52657 109 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 FCGRTP55899 365 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 GTF2BQ00403 316 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TRPV3Q8NET8 790 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 BTBD9Q96Q07 612 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TULP2O00295 520 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 HAVCR1Q96D42 359 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 C7orf26Q96N11 449 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 C1QTNF1Q9BXJ1 281 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 DENND2DQ9H6A0 471 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SMPD3Q9NY59 655 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SPG21Q9NZD8 308 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 PMF1-BGLAPU3KQ54 211 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 CCNYL3P0C7X3 344 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RPS6KA3P51812 740 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 CDH13P55290 713 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 TAS2R40P59535 323 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RPL7AP62424 266 aaKnown RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 CPSF6Q16630 551 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 DEF8Q6ZN54 512 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 BTN2A1Q7KYR7 527 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SPPL2CQ8IUH8 684 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SLC44A1Q8WWI5 657 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RBM4BQ9BQ04 359 aaKnown RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 C2orf49Q9BVC5 232 aaPredicted RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RBM4Q9BWF3 364 aaKnown RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 GIN1Q9NXP7 522 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RLN1P04808 185 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SDC2P34741 201 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 IL18Q14116 193 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SMCO1Q147U7 214 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 LDLRAP1Q5SW96 308 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 GLYATQ6IB77 296 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 GPR156Q8NFN8 814 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 LGMNQ99538 433 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 PORCNQ9H237 461 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 RHBGQ9H310 441 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 MUC13Q9H3R2 512 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 VWA7Q9Y334 891 aa13.71□□□□□ -0.21
CLCN6-201ENST00000312413 REXO2Q9Y3B8 237 aaKnown RBP13.71□□□□□ -0.21
CLCN6-201ENST00000312413 MTHFRP42898 656 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 FSTL1Q12841 308 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 KCNA10Q16322 511 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 METTL21CQ5VZV1 264 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 POTEHQ6S545 545 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 RASGEF1CQ8N431 466 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 CPSF7Q8N684 471 aaKnown RBP13.71□□□□□ -0.22
CLCN6-201ENST00000312413 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.22
CLCN6-201ENST00000312413 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 C11orf24Q96F05 449 aaPredicted RBP13.71□□□□□ -0.22
CLCN6-201ENST00000312413 RHOJQ9H4E5 214 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.22
CLCN6-201ENST00000312413 ZC3H13Q5T200 1668 aaKnown RBP13.71□□□□□ -0.22
CLCN6-201ENST00000312413 MADDQ8WXG6 1647 aa13.7□□□□□ -0.22
CLCN6-201ENST00000312413 BCKDKO14874 412 aa13.7□□□□□ -0.22
CLCN6-201ENST00000312413 GOT1P17174 413 aa13.7□□□□□ -0.22
CLCN6-201ENST00000312413 MPSTP25325 297 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms