RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CBR4Q8N4T8 237 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 TMEM40Q8WWA1 233 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 FAM162AQ96A26 154 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 DGCR14Q96DF8 476 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 CCDC126Q96EE4 140 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 PPP1R10Q96QC0 940 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZFP14Q9HCL3 533 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 CASS4Q9NQ75 786 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 OXSMQ9NWU1 459 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 NDUFA13Q9P0J0 144 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 IGKV6D-21A0A0A0MT36 114 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 A0A0J9YYE9 177 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 TMEM114B3SHH9 223 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 H3BSA7 217 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 TOMM70O94826 608 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZBTB11O95625 1053 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 JUNP05412 331 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 YAP1P46937 504 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 NAB1Q13506 487 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 FAM126BQ8IXS8 530 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 MAML3Q96JK9 1138 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 PPM1MQ96MI6 270 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 HNRNPABQ99729 332 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 DHRS4Q9BTZ2 278 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 BEGAINQ9BUH8 593 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 ARMC7Q9H6L4 198 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 RUBCNLQ9H714 662 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 POLR1BQ9H9Y6 1135 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 PNMA8BQ9ULN7 279 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 PTGDR2Q9Y5Y4 395 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 UNC80Q8N2C7 3258 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 FAM155AB1AL88 458 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZBTB42B2RXF5 422 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 UBXN8O00124 270 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 IPO13O94829 963 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 SERPINF2P08697 491 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZNF24P17028 368 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 PPM1FP49593 454 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 INHBCP55103 352 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 PTPRNQ16849 979 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZYG11AQ6WRX3 759 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 CHST15Q7LFX5 561 aaPredicted RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 NANOGNBQ7Z5D8 188 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 ZC3HC1Q86WB0 502 aaKnown RBP14.09□□□□□ -0.15
SDC2-201ENST00000302190 DDI1Q8WTU0 396 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 MZB1Q8WU39 189 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 HGH1Q9BTY7 390 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 HPS4Q9NQG7 708 aa14.09□□□□□ -0.15
SDC2-201ENST00000302190 A0A1W2PQH9 124 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 TYW5A2RUC4 315 aaKnown RBP14.08□□□□□ -0.15
SDC2-201ENST00000302190 SLC2A4P14672 509 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 HSPA13P48723 471 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 FKBP1BP68106 108 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 RAD51Q06609 339 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 GK3PQ14409 553 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 FAM171A1Q5VUB5 890 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 SZRD1Q7Z422 152 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 ZNF554Q86TJ5 538 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 LGI2Q8N0V4 545 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 SLC45A3Q96JT2 553 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.15
SDC2-201ENST00000302190 TM6SF2Q9BZW4 377 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 STN1Q9H668 368 aaKnown RBP14.08□□□□□ -0.15
SDC2-201ENST00000302190 TBC1D13Q9NVG8 400 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 ZNHIT2Q9UHR6 403 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 EMCNQ9ULC0 261 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 ANKRD6Q9Y2G4 727 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 GMEB1Q9Y692 573 aa14.08□□□□□ -0.15
SDC2-201ENST00000302190 DNAJC25-GNG10A0A024R161 153 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.16
SDC2-201ENST00000302190 LSAMPQ13449 338 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 BFSP2Q13515 415 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 TIGD5Q53EQ6 642 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 HECTD2Q5U5R9 776 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 ANKS6Q68DC2 871 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 CANT1Q8WVQ1 401 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 PSMG2Q969U7 264 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 CAPNS2Q96L46 248 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 PRPF19Q9UMS4 504 aaKnown RBP14.08□□□□□ -0.16
SDC2-201ENST00000302190 MTHFD1P11586 935 aaKnown RBP14.08□□□□□ -0.16
SDC2-201ENST00000302190 DGCR6Q14129 220 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 IQSEC1Q6DN90 963 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 PGAM4Q8N0Y7 254 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 AGO3Q9H9G7 860 aaKnown RBP14.08□□□□□ -0.16
SDC2-201ENST00000302190 OLA1Q9NTK5 396 aaKnown RBP14.08□□□□□ -0.16
SDC2-201ENST00000302190 WDR37Q9Y2I8 494 aa14.08□□□□□ -0.16
SDC2-201ENST00000302190 HMX2A2RU54 273 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 DPYSL4O14531 572 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 MAN1A2O60476 641 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CCNT2O60583 730 aaKnown RBP14.07□□□□□ -0.16
SDC2-201ENST00000302190 SEMG2Q02383 582 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 CEACAM7Q14002 265 aa14.07□□□□□ -0.16
SDC2-201ENST00000302190 TLR1Q15399 786 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms