RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CDH4P55283 916 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 E2F1Q01094 437 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 INSM1Q01101 510 aaPredicted RBP21.24■□□□□ 0.99
SMCO4-201ENST00000298966 AFMIDQ63HM1 303 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 NADSYN1Q6IA69 706 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 TIGD7Q6NT04 549 aaPredicted RBP21.24■□□□□ 0.99
SMCO4-201ENST00000298966 C14orf80Q86SX3 495 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 MFN1Q8IWA4 741 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 HTR3CQ8WXA8 447 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 TTC17Q96AE7 1141 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 ZDHHC18Q9NUE0 388 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 SNX24Q9Y343 169 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 HECTD1Q9ULT8 2610 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 KCNN4O15554 427 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 CLDN11O75508 207 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 GCATO75600 419 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 ACP1P24666 158 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 IVDP26440 423 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 CSKP41240 450 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 GARSP41250 739 aaKnown RBP21.23■□□□□ 0.99
SMCO4-201ENST00000298966 UCNP55089 124 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 PCBP4P57723 403 aaKnown RBP21.23■□□□□ 0.99
SMCO4-201ENST00000298966 TMPRSS3P57727 454 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 PARP15Q460N3 678 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 FAM133BQ5BKY9 247 aaKnown RBP21.23■□□□□ 0.99
SMCO4-201ENST00000298966 ARTNQ5T4W7 220 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 RFWD3Q6PCD5 774 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 KDM7AQ6ZMT4 941 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 MREGQ8N565 214 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 KDM1BQ8NB78 822 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 OR14C36Q8NHC7 312 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 ART4Q93070 314 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 NAF1Q96HR8 494 aaKnown RBP21.23■□□□□ 0.99
SMCO4-201ENST00000298966 TRIM31Q9BZY9 425 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 KLC2Q9H0B6 622 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 VIPAS39Q9H9C1 493 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 ATMQ13315 3056 aa21.23■□□□□ 0.99
SMCO4-201ENST00000298966 A0A1B0GVM2 712 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 TCAF2A6NFQ2 919 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 ARHGAP42A6NI28 874 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 DNALI1O14645 258 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MAP2K7O14733 419 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MAGEC1O60732 1142 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MT-CO3P00414 261 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 CCNCP24863 283 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 RBL1P28749 1068 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 ETFBP38117 255 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 GGCXP38435 758 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 TNNT3P45378 269 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-201ENST00000298966 PSMD8P48556 350 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MORF4L2Q15014 288 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 C9orf64Q5T6V5 341 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 NAPEPLDQ6IQ20 393 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 ZDHHC24Q6UX98 284 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 KANSL1Q7Z3B3 1105 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 HOOK3Q86VS8 718 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 CCDC117Q8IWD4 279 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-201ENST00000298966 LGI2Q8N0V4 545 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 NPWQ8N729 165 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 FAM71DQ8N9W8 422 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MFSD2AQ8NA29 543 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 FIBINQ8TAL6 211 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 MRGPRX3Q96LB0 322 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 FMO2Q99518 471 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 PHACTR1Q9C0D0 580 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 TRHDEQ9UKU6 1024 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 SHOC2Q9UQ13 582 aa21.22■□□□□ 0.99
SMCO4-201ENST00000298966 C10orf142B7Z368 130 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ADH1BP00325 375 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ADPRHP54922 357 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 GPS1Q13098 491 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 CASP8Q14790 479 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 PROX2Q3B8N5 592 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ZNF783Q6ZMS7 281 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 SETD3Q86TU7 594 aaPredicted RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 PRPF39Q86UA1 669 aaKnown RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 SPATS2Q86XZ4 545 aaKnown RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 CCDC13Q8IYE1 715 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ATPAF2Q8N5M1 289 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 HJURPQ8NCD3 748 aaPredicted RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 CCNYQ8ND76 341 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ZNF578Q96N58 590 aaPredicted RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 PPP1R2P1Q96PQ5 205 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 FRMD8Q9BZ67 464 aaPredicted RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 CLMPQ9H6B4 373 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 ANAPC5Q9UJX4 755 aa21.21■□□□□ 0.99
SMCO4-201ENST00000298966 NYNRINQ9P2P1 1898 aaKnown RBP21.21■□□□□ 0.99
SMCO4-201ENST00000298966 TBC1D3DA0A087WVF3 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3IA0A087WXS9 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3EA0A087X179 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3KA0A087X1G2 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 EDDM13A0A1B0GTR0 161 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 GOLGA6L7A0A1B0GV03 622 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3FA6NER0 549 aaPredicted RBP21.2■□□□□ 0.98
SMCO4-201ENST00000298966 CYSRT1A8MQ03 144 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3LB9A6J9 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 SRPRAP08240 638 aaKnown RBP21.2■□□□□ 0.98
SMCO4-201ENST00000298966 TBC1D3HP0C7X1 549 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 C5AR1P21730 350 aa21.2■□□□□ 0.98
SMCO4-201ENST00000298966 SLC6A4P31645 630 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms