RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZNF460Q14592 562 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 C16orf72Q14CZ0 275 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 RANBP10Q6VN20 620 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CYHR1Q6ZMK1 362 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 OTOP3Q7RTS5 596 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ADGRG5Q8IZF4 528 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ZNF786Q8N393 782 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CCDC68Q9H2F9 335 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 WDCPQ9H6R7 721 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 MAP10Q9P2G4 905 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 GNPTGQ9UJJ9 305 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 B3GNT3Q9Y2A9 372 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 PTCH2Q9Y6C5 1203 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 SLC30A1Q9Y6M5 507 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 H3BMQ9 156 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 H3BRB1 525 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 MATN3O15232 486 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ACOX3O15254 700 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 VPS4BO75351 444 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 BAIAP3O94812 1187 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CPNE6O95741 557 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 LILRA4P59901 499 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CTBSQ01459 385 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TUBA3CQ13748 450 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 CSHL1Q14406 222 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 UGT3A2Q3SY77 523 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ZNF678Q5SXM1 525 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ZNF618Q5T7W0 954 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 ZNF470Q6ECI4 717 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TIGD7Q6NT04 549 aaPredicted RBP19.23■□□□□ 0.67
TRA2A-201ENST00000297071 PTAR1Q7Z6K3 402 aaPredicted RBP19.23■□□□□ 0.67
TRA2A-201ENST00000297071 SLC15A3Q8IY34 581 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TBC1D15Q8TC07 691 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 THAP11Q96EK4 314 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 C19orf60Q96EN9 201 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 COG8Q96MW5 612 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TRIM62Q9BVG3 475 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TRIM54Q9BYV2 358 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 TUT1Q9H6E5 874 aaKnown RBP19.23■□□□□ 0.67
TRA2A-201ENST00000297071 DDIT4Q9NX09 232 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 FNIP2Q9P278 1114 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 GBF1Q92538 1859 aa19.23■□□□□ 0.67
TRA2A-201ENST00000297071 YJEFN3A6XGL0 299 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 GPR32O75388 356 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 KCNA5P22460 613 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 HLCSP50747 726 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 TMBIM6P55061 237 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 NAA20P61599 178 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 PPP1R3AQ16821 1122 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 SLC44A4Q53GD3 710 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 TBC1D21Q8IYX1 336 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 DHRSXQ8N5I4 330 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 GIPC3Q8TF64 312 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 FATE1Q969F0 183 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 FICDQ9BVA6 458 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 TNFRSF12AQ9NP84 129 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 CSADQ9Y600 493 aa19.22■□□□□ 0.67
TRA2A-201ENST00000297071 A0A0J9YYE9 177 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 NEMP2A6NFY4 417 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 TMEM221A6NGB7 291 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 GIPC1O14908 333 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 FGF10O15520 208 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ESRRBO95718 433 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 GFAPP14136 432 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 HDCP19113 662 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 CBX3Q13185 183 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 POU6F1Q14863 301 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 RETREG3Q86VR2 466 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ARHGAP12Q8IWW6 846 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 MIER2Q8N344 545 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 R3HDMLQ9H3Y0 253 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 INTS10Q9NVR2 710 aaKnown RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 UBP1Q9NZI7 540 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ITGB1BP2Q9UKP3 347 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 WDR37Q9Y2I8 494 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 GJA3Q9Y6H8 435 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 FXYD1O00168 92 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 MAGEB3O15480 346 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 CLOCKO15516 846 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ATE1O95260 518 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ALDOCP09972 364 aaKnown RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 KCNC4Q03721 635 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 CBX2Q14781 532 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 FXNQ16595 210 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 FKBP9P1Q75LS8 142 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 TMEM86AQ8N2M4 240 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ATPAF2Q8N5M1 289 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 MED10Q9BTT4 135 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 SEZ6LQ9BYH1 1024 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 TKTL2Q9H0I9 626 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 NXF3Q9H4D5 531 aaKnown RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 MAGEE1Q9HCI5 957 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 ATP13A1Q9HD20 1204 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 CHST12Q9NRB3 414 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 SMPD3Q9NY59 655 aaPredicted RBP19.21■□□□□ 0.67
TRA2A-201ENST00000297071 PKD2L2Q9NZM6 624 aa19.21■□□□□ 0.67
TRA2A-201ENST00000297071 PCDHA9Q9Y5H5 950 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms