RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 GM2AP17900 193 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 HOXA9P31269 272 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 ARSDP51689 593 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 RHOAP61586 193 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 CMPK2Q5EBM0 449 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 CES4AQ5XG92 561 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 NCEH1Q6PIU2 408 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 GLT6D1Q7Z4J2 308 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.36■□□□□ 0.05
SF3B4-201ENST00000271628 LEMD2Q8NC56 503 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 OR6Y1Q8NGX8 325 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 OR4L1Q8NH43 312 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 FIBINQ8TAL6 211 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 C20orf27Q9GZN8 174 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 WWP1Q9H0M0 922 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 MMADHCQ9H3L0 296 aaPredicted RBP15.36■□□□□ 0.05
SF3B4-201ENST00000271628 NLE1Q9NVX2 485 aaPredicted RBP15.36■□□□□ 0.05
SF3B4-201ENST00000271628 PCDHGC4Q9Y5F7 938 aa15.36■□□□□ 0.05
SF3B4-201ENST00000271628 C5orf67F2Z3F1 127 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 LIN7AO14910 233 aaPredicted RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 CD3EAPO15446 510 aaKnown RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 GOT2P00505 430 aaKnown RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 PRLP01236 227 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 GJA1P17302 382 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 SERPINB3P29508 390 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 TAS2R39P59534 338 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 ABCE1P61221 599 aaKnown RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 ITGA9Q13797 1035 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 ARHGAP15Q53QZ3 475 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 CEP97Q8IW35 865 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 TEX9Q8N6V9 391 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 OR13C4Q8NGS5 318 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 CDKN2AIPNLQ96HQ2 116 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 DNAJC1Q96KC8 554 aaKnown RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 SCYL1Q96KG9 808 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 MIPEPQ99797 713 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 CADM1Q9BY67 442 aaKnown RBP15.35■□□□□ 0.05
SF3B4-201ENST00000271628 HACD3Q9P035 362 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 VWA7Q9Y334 891 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 KCTD3Q9Y597 815 aa15.35■□□□□ 0.05
SF3B4-201ENST00000271628 GYG2O15488 501 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 GSC2O15499 205 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 S1PR4O95977 384 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 RB1P06400 928 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 OGNP20774 298 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 PSMA3P25788 255 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 GMPRP36959 345 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 SLC26A3P40879 764 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 TAF11Q15544 211 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 FAM83EQ2M2I3 478 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 GPR158Q5T848 1215 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 FAM45BPQ6NSW5 357 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 RNF135Q8IUD6 432 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 CMTM8Q8IZV2 173 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 CENPLQ8N0S6 344 aaPredicted RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 FSTL5Q8N475 847 aaPredicted RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 FAM45AQ8TCE6 357 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 KCTD4Q8WVF5 259 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 BHMTQ93088 406 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 NAF1Q96HR8 494 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 STN1Q9H668 368 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 CATSPERZQ9NTU4 200 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ARL8BQ9NVJ2 186 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 OXSMQ9NWU1 459 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 LHX3Q9UBR4 397 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 DPP7Q9UHL4 492 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 TMEM114B3SHH9 223 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 AURKAO14965 403 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 PDHA1P08559 390 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 PIRTP0C851 137 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 HSPA1AP0DMV8 641 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 HSPA1BP0DMV9 641 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 MAPK8P45983 427 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 PLK1P53350 603 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 AP1S1P61966 158 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ASPHQ12797 758 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ZNF789Q5FWF6 425 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 HECTD2Q5U5R9 776 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 LRRC8EQ6NSJ5 796 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ZYG11AQ6WRX3 759 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 TPGS1Q6ZTW0 290 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 C7orf61Q8IZ16 206 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 LPCAT1Q8NF37 534 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ZNF395Q9H8N7 513 aaPredicted RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 MAN1C1Q9NR34 630 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 CPSF2Q9P2I0 782 aaKnown RBP15.34■□□□□ 0.05
SF3B4-201ENST00000271628 ZMYM5Q9UJ78 669 aa15.34■□□□□ 0.05
SF3B4-201ENST00000271628 CCDC162PA2VCL2 907 aa15.33■□□□□ 0.04
SF3B4-201ENST00000271628 ITM2AO43736 263 aa15.33■□□□□ 0.04
SF3B4-201ENST00000271628 XYLBO75191 536 aa15.33■□□□□ 0.04
SF3B4-201ENST00000271628 ENTPD5O75356 428 aa15.33■□□□□ 0.04
SF3B4-201ENST00000271628 HNRNPA1P09651 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
SF3B4-201ENST00000271628 KITP10721 976 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms