RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 C1orf216Q8TAB5 229 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 BRSK1Q8TDC3 778 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 PDCD6IPQ8WUM4 868 aaKnown RBP14.31□□□□□ -0.12
SSBP1-201ENST00000265304 RLN3Q8WXF3 142 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 PEX13Q92968 403 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 EID2BQ96D98 161 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 COQ10AQ96MF6 247 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 LENG8Q96PV6 779 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-201ENST00000265304 RANBP9Q96S59 729 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 FICDQ9BVA6 458 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 ZFR2Q9UPR6 939 aaKnown RBP14.31□□□□□ -0.12
SSBP1-201ENST00000265304 SHOC2Q9UQ13 582 aa14.31□□□□□ -0.12
SSBP1-201ENST00000265304 FAM186AA6NE01 2351 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 TMEM63AO94886 807 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 GRIA1P42261 906 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 RPL21P46778 160 aaKnown RBP14.3□□□□□ -0.12
SSBP1-201ENST00000265304 NPY2RP49146 381 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 STC1P52823 247 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 GALNT3Q14435 633 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 CNGA3Q16281 694 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 PCSK7Q16549 785 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 ZNF284Q2VY69 593 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 ANKRD22Q5VYY1 191 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 KIAA0895LQ68EN5 471 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 TECPR1Q7Z6L1 1165 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 BBOF1Q8ND07 529 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 LPCAT1Q8NF37 534 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 PRSS33Q8NF86 280 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 FOXJ1Q92949 421 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 RMDN1Q96DB5 314 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 SNF8Q96H20 258 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 TRIM51Q9BSJ1 452 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 RAB17Q9H0T7 212 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 CDH19Q9H159 772 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 XAB2Q9HCS7 855 aaKnown RBP14.3□□□□□ -0.12
SSBP1-201ENST00000265304 GRHL1Q9NZI5 618 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 ASIC3Q9UHC3 531 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 GGT7Q9UJ14 662 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 DMTF1Q9Y222 760 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-201ENST00000265304 SPO11Q9Y5K1 396 aa14.3□□□□□ -0.12
SSBP1-201ENST00000265304 PIKFYVEQ9Y2I7 2098 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 MROH6A6NGR9 719 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 E7EVH7 732 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 F5H423 210 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 LDB2O43679 373 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 RNGTTO60942 597 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 USP12O75317 370 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 ALPIP09923 528 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 BCKDHBP21953 392 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 XPAP23025 273 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 EPHB1P54762 984 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PTPN5P54829 565 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 BASP1P80723 227 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 SARNPP82979 210 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 DPTQ07507 201 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 OLIG2Q13516 323 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 SPARCL1Q14515 664 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PTPRRQ15256 657 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 TAF1AQ15573 450 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PLK5Q496M5 336 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 DNTTIP2Q5QJE6 756 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PEAR1Q5VY43 1037 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PMS2CLQ68D20 193 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 C8orf74Q6P047 294 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 ZNF765Q7L2R6 523 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 SLC41A1Q8IVJ1 513 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 GANCQ8TET4 914 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PTCD2Q8WV60 388 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 LOXL4Q96JB6 756 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 KLF6Q99612 283 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 GPR174Q9BXC1 333 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PHACTR1Q9C0D0 580 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 EPC1Q9H2F5 836 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 C6orf106Q9H6K1 298 aaPredicted RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 ZFYVE1Q9HBF4 777 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 DMGDHQ9UI17 866 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 UTP11Q9Y3A2 253 aaKnown RBP14.29□□□□□ -0.12
SSBP1-201ENST00000265304 ZNF292O60281 2723 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 PLXNB3Q9ULL4 1909 aa14.29□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3DA0A087WVF3 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3IA0A087WXS9 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3EA0A087X179 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3KA0A087X1G2 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3FA6NER0 549 aaPredicted RBP14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3LB9A6J9 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3HP0C7X1 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 CTPS1P17812 591 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TEAD1P28347 426 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TNNT3P45378 269 aaPredicted RBP14.28□□□□□ -0.12
SSBP1-201ENST00000265304 VPS41P49754 854 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms