RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.32
TMEM260-201ENST00000261556 hCG_2039718K7EN88 272 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 AP1G1O43747 822 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 PIGNO95427 931 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 CSF2P04141 144 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 CYP2C8P10632 490 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 MYL4P12829 197 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 ERVK-8P63133 956 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 BNC1Q01954 994 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 FASTKQ14296 549 aaKnown RBP13.02□□□□□ -0.32
TMEM260-201ENST00000261556 SAMD4BQ5PRF9 694 aaKnown RBP13.02□□□□□ -0.32
TMEM260-201ENST00000261556 CDHR3Q6ZTQ4 885 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 CHSY3Q70JA7 882 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 KRT73Q86Y46 540 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 FEM1AQ9BSK4 669 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 CNOT6Q9ULM6 557 aaKnown RBP13.02□□□□□ -0.32
TMEM260-201ENST00000261556 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.32
TMEM260-201ENST00000261556 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 PDHXO00330 501 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 CXCL11O14625 94 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 APOL1O14791 398 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 PROS1P07225 676 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 ARNTP27540 789 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 GP5P40197 560 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 RAB25P57735 213 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 ORC1Q13415 861 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-201ENST00000261556 GPC2Q8N158 579 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 HOXD1Q9GZZ0 328 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 NARFLQ9H6Q4 476 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 TRMT6Q9UJA5 497 aaKnown RBP13.02□□□□□ -0.33
TMEM260-201ENST00000261556 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 PGRP06401 933 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 CYP11B1P15538 503 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
TMEM260-201ENST00000261556 GRK3P35626 688 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
TMEM260-201ENST00000261556 MS4A2Q01362 244 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 QPRTQ15274 297 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 METTL7BQ6UX53 244 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 PPP1R2P1Q96PQ5 205 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 KIF17Q9P2E2 1029 aa13.02□□□□□ -0.33
TMEM260-201ENST00000261556 A0A087WZ62 844 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 SDR42E2A6NKP2 422 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 FAM20BO75063 409 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 JRKO75564 520 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 TAF6P49848 677 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 CYP4F2P78329 520 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 CYP4F3Q08477 520 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LY6KQ17RY6 165 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PLEKHG6Q3KR16 790 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 RNF111Q6ZNA4 994 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 POF1BQ8WVV4 589 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 TRIM45Q9H8W5 580 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 ING3Q9NXR8 418 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 TSR3Q9UJK0 312 aaKnown RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 ZNF222Q9UK12 451 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 UBQLN1Q9UMX0 589 aaKnown RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 SNX7Q9UNH6 387 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LIASO43766 372 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 OR2B3O76000 313 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 GTF2H3Q13889 308 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 SV2CQ496J9 727 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PGAM4Q8N0Y7 254 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 CDCA5Q96FF9 252 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 TMEM169Q96HH4 297 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 OSMRQ99650 979 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 BDH2Q9BUT1 245 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 RSPH9Q9H1X1 276 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LOC105371267A0A1B0GV96 52 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 WWP2O00308 870 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PROSCO94903 275 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 INSRRP14616 1297 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PTPN2P17706 415 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PRIM2P49643 509 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 PIGHQ14442 188 aaPredicted RBP13.01□□□□□ -0.33
TMEM260-201ENST00000261556 SYT16Q17RD7 645 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LRIT3Q3SXY7 679 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 ATAD3CQ5T2N8 411 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 NODALQ96S42 347 aa13.01□□□□□ -0.33
TMEM260-201ENST00000261556 FUNDC2Q9BWH2 189 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms