RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 VIPAS39Q9H9C1 493 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 LTB4R2Q9NPC1 389 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 C17orf51A8MQB3 221 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 ATP9BO43861 1147 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 TIMP2P16035 220 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 MGAT1P26572 445 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 PDHA2P29803 388 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 AGTR2P50052 363 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 DR1Q01658 176 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 NME3Q13232 169 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 GRM3Q14832 879 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 TDRD12Q587J7 1177 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 UBE3DQ7Z6J8 389 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 CILP2Q8IUL8 1156 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 FAM160A2Q8N612 972 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 C2CD4AQ8NCU7 369 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 PHOSPHO2Q8TCD6 241 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 FAM81BQ96LP2 452 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 EBNA1BP2Q99848 306 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 TSPYL1Q9H0U9 437 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 MAP10Q9P2G4 905 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 AHCTF1Q8WYP5 2266 aa5.65□□□□□ -1.5
TOPBP1-201ENST00000260810 CFAP69A5D8W1 941 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 H3BQ06 376 aaPredicted RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 PSMA2P25787 234 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 ACADLP28330 430 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 RAB27AP51159 221 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 LSM11P83369 360 aaKnown RBP eCLIP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 CKAP4Q07065 602 aaKnown RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 EXOSC6Q5RKV6 272 aaKnown RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 GPRC6AQ5T6X5 926 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC41A1Q8IVJ1 513 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC44A3Q8N4M1 653 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 SPATA13Q96N96 652 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 APOL5Q9BWW9 433 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TRIM31Q9BZY9 425 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 ABCF3Q9NUQ8 709 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 RASAL2Q9UJF2 1139 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TMEM110-MUSTN1A8MSY1 372 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 KDELR3O43731 214 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 KIF5CO60282 957 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 LYPLA1O75608 230 aaPredicted RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 KRT13P13646 458 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TCP1P17987 556 aaKnown RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TPSB2P20231 275 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 HNF1BP35680 557 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 VPS41P49754 854 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 RWDD2BP57060 319 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 ZP2Q05996 745 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 XRCC4Q13426 336 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 SF1Q15637 639 aaKnown RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TPSAB1Q15661 275 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 CTXN3Q4LDR2 81 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKRD20A4Q4UJ75 823 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 LRRC8BQ6P9F7 803 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 TMEM74Q96NL1 305 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 ABCG8Q9H221 673 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 RCOR3Q9P2K3 495 aaPredicted RBP5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 EPS15L1Q9UBC2 864 aa5.65□□□□□ -1.51
TOPBP1-201ENST00000260810 CCDC78A2IDD5 438 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TULP3O75386 442 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CHN1P15882 459 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GJA4P35212 333 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 PSEN1P49768 467 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 IFT88Q13099 833 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 PLEKHG6Q3KR16 790 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SCAMP4Q969E2 229 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TCHPQ9BT92 498 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SLITRK6Q9H5Y7 841 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SERHLQ9NQF3 203 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 FARSBQ9NSD9 589 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CTTNBP2NLQ9P2B4 639 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 F8W8V4 182 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 KIAA0754O94854 1291 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CSPG5O95196 566 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GAS8O95995 478 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 IGLV3-19P01714 112 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CLPSP04118 112 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 HLA-EP13747 358 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CDC25CP30307 473 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 ACTN2P35609 894 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 MAGEA9P43362 315 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 COPS2P61201 443 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 DUSP8Q13202 625 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 BTBD8Q5XKL5 378 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 KLHL17Q6TDP4 642 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TIFABQ6ZNK6 161 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 PARS2Q7L3T8 475 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 C17orf82Q86X59 251 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 BHMTQ93088 406 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 MRPL38Q96DV4 380 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 EBF3Q9H4W6 596 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 MKS1Q9NXB0 559 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CA5BQ9Y2D0 317 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM169AQ9Y6X4 670 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SDR42E2A6NKP2 422 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 UPK1AO00322 258 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms