RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MCCC1Q96RQ3 725 aaPredicted RBP23.02■■□□□ 1.28
LSM4-201ENST00000252816 APOOQ9BUR5 198 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 SAE1Q9UBE0 346 aaPredicted RBP23.02■■□□□ 1.28
LSM4-201ENST00000252816 PPIL1Q9Y3C6 166 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 A0A0U1RQS6 177 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 H3BM21 787 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 SCAMP1O15126 338 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 IPO7O95373 1038 aaKnown RBP23.01■■□□□ 1.27
LSM4-201ENST00000252816 ALPIP09923 528 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 PEX5P50542 639 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 AP1B1Q10567 949 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 MTM1Q13496 603 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 PDK1Q15118 436 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 DHRS13Q6UX07 377 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 DAAM2Q86T65 1068 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 PELI3Q8N2H9 469 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 CBARPQ8N350 705 aaPredicted RBP23.01■■□□□ 1.27
LSM4-201ENST00000252816 CEP41Q9BYV8 373 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 IMPACTQ9P2X3 320 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 CHKBQ9Y259 395 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 PCDHGA1Q9Y5H4 931 aa23.01■■□□□ 1.27
LSM4-201ENST00000252816 BTNL10A8MVZ5 291 aa23■■□□□ 1.27
LSM4-201ENST00000252816 CST8O60676 142 aa23■■□□□ 1.27
LSM4-201ENST00000252816 PRLP01236 227 aa23■■□□□ 1.27
LSM4-201ENST00000252816 MMP2P08253 660 aa23■■□□□ 1.27
LSM4-201ENST00000252816 CYP2A6P11509 494 aaPredicted RBP23■■□□□ 1.27
LSM4-201ENST00000252816 PECAM1P16284 738 aaPredicted RBP23■■□□□ 1.27
LSM4-201ENST00000252816 CKMT2P17540 419 aa23■■□□□ 1.27
LSM4-201ENST00000252816 VAV2P52735 878 aa23■■□□□ 1.27
LSM4-201ENST00000252816 TFDP2Q14188 446 aa23■■□□□ 1.27
LSM4-201ENST00000252816 NFATC4Q14934 902 aa23■■□□□ 1.27
LSM4-201ENST00000252816 KAZNQ674X7 775 aa23■■□□□ 1.27
LSM4-201ENST00000252816 UNQ6494/PRO21346Q6UXR6 183 aa23■■□□□ 1.27
LSM4-201ENST00000252816 TMPRSS7Q7RTY8 843 aa23■■□□□ 1.27
LSM4-201ENST00000252816 HSD11B1LQ7Z5J1 315 aa23■■□□□ 1.27
LSM4-201ENST00000252816 MARCH9Q86YJ5 346 aa23■■□□□ 1.27
LSM4-201ENST00000252816 PHACTR4Q8IZ21 702 aa23■■□□□ 1.27
LSM4-201ENST00000252816 TDRD1Q9BXT4 1180 aaKnown RBP23■■□□□ 1.27
LSM4-201ENST00000252816 HAUS2Q9NVX0 235 aa23■■□□□ 1.27
LSM4-201ENST00000252816 NLGN3Q9NZ94 848 aa23■■□□□ 1.27
LSM4-201ENST00000252816 APOBEC3BQ9UH17 382 aaKnown RBP23■■□□□ 1.27
LSM4-201ENST00000252816 IGF2RP11717 2491 aa23■■□□□ 1.27
LSM4-201ENST00000252816 PTPRBP23467 1997 aa23■■□□□ 1.27
LSM4-201ENST00000252816 hCG_1818297A0A087WSY0 165 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 NEMP2A6NFY4 417 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 K7ESM1 405 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 PPP1R12AO14974 1030 aaPredicted RBP22.99■■□□□ 1.27
LSM4-201ENST00000252816 PJA2O43164 708 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 AQP9O43315 295 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 GCATO75600 419 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 RFPL3O75679 317 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 ZRANB2O95218 330 aaKnown RBP eCLIP22.99■■□□□ 1.273e-6■■■■■ 27.8
LSM4-201ENST00000252816 MYF5P13349 255 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 HNF1BP35680 557 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 ALG11Q2TAA5 492 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 TFDP3Q5H9I0 405 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 DENND2CQ68D51 928 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 KCTD16Q68DU8 428 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 CCNI2Q6ZMN8 369 aaPredicted RBP22.99■■□□□ 1.27
LSM4-201ENST00000252816 USP45Q70EL2 814 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 RCOR2Q8IZ40 523 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 LMX1AQ8TE12 382 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 TSACCQ96A04 125 aaPredicted RBP22.99■■□□□ 1.27
LSM4-201ENST00000252816 FUBP1Q96AE4 644 aaKnown RBP22.99■■□□□ 1.27
LSM4-201ENST00000252816 LRRC61Q9BV99 259 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 CSNK1G3Q9Y6M4 447 aa22.99■■□□□ 1.27
LSM4-201ENST00000252816 A0A0J9YYE9 177 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 TRBC1P01850 177 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 C1SP09871 688 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 ACP1P24666 158 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 NFKBIAP25963 317 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 ETV3P41162 512 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 CD86P42081 329 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 NR2C2P49116 596 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 SKOR1P84550 965 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 PPARDQ03181 441 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 C1orf61Q13536 156 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 SMAD1Q15797 465 aaKnown RBP22.98■■□□□ 1.27
LSM4-201ENST00000252816 PRRT3Q5FWE3 981 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 FAXCQ5TGI0 409 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 ENPP7Q6UWV6 458 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 RFLNAQ6ZTI6 216 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 EXD1Q8NHP7 514 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 BTN2A2Q8WVV5 523 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 NUS1Q96E22 293 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 DTD2Q96FN9 168 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 APOLD1Q96LR9 279 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 BRD8Q9H0E9 1235 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 SEPT10Q9P0V9 454 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 SPASTQ9UBP0 616 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 PLXNB3Q9ULL4 1909 aa22.98■■□□□ 1.27
LSM4-201ENST00000252816 GOLGA4Q13439 2230 aaKnown RBP22.97■■□□□ 1.27
LSM4-201ENST00000252816 LY6G6EA0A0G2JKS1 128 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 A0A0U1RQJ8 604 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 CELA2BP08218 269 aaPredicted RBP22.97■■□□□ 1.27
LSM4-201ENST00000252816 ALPPL2P10696 532 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 TRIM23P36406 574 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 NAP1L1P55209 391 aaKnown RBP22.97■■□□□ 1.27
LSM4-201ENST00000252816 CLDN6P56747 220 aa22.97■■□□□ 1.27
LSM4-201ENST00000252816 PRKD1Q15139 912 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms