RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 BBS5Q8N3I7 341 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 ACTRT2Q8TDY3 377 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 CNDP1Q96KN2 507 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 NMRK1Q9NWW6 199 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 AGO1Q9UL18 857 aaKnown RBP21.73■■□□□ 1.07
CLN6-201ENST00000249806 ARHGAP26Q9UNA1 814 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 CLDN11O75508 207 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 RBP1P09455 135 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 PRDX6P30041 224 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 GCKP35557 465 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 VEGFBP49765 207 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 TIAL1Q01085 375 aaKnown RBP eCLIP21.72■■□□□ 1.07
CLN6-201ENST00000249806 LRRC74BQ6ZQY2 392 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 MYLK4Q86YV6 388 aaPredicted RBP21.72■■□□□ 1.07
CLN6-201ENST00000249806 LMNTD2Q8IXW0 634 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 OR4L1Q8NH43 312 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 OVCA2Q8WZ82 227 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 RMDN1Q96DB5 314 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 CDH22Q9UJ99 828 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.72■■□□□ 1.07
CLN6-201ENST00000249806 ABLIM3O94929 683 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 RHOCP08134 193 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 PDHA1P08559 390 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 VHLP40337 213 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 ZNF177Q13360 481 aaPredicted RBP21.72■■□□□ 1.07
CLN6-201ENST00000249806 TAF12Q16514 161 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 TRIM68Q6AZZ1 485 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 PGM2L1Q6PCE3 622 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 PLD4Q96BZ4 506 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 CCDC124Q96CT7 223 aaKnown RBP21.72■■□□□ 1.07
CLN6-201ENST00000249806 CDKN2AIPNLQ96HQ2 116 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 SMPD4Q9NXE4 827 aa21.72■■□□□ 1.07
CLN6-201ENST00000249806 AIM2O14862 343 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 CYTH1Q15438 398 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 SPOUT1Q5T280 376 aaKnown RBP21.71■■□□□ 1.07
CLN6-201ENST00000249806 ADGRF1Q5T601 910 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 FAM45BPQ6NSW5 357 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 MRNIPQ6NTE8 343 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 SNX32Q86XE0 403 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 FAM45AQ8TCE6 357 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 PTERQ96BW5 349 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 CEP295NLQ96MC4 621 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 CYP2S1Q96SQ9 504 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 RTKNQ9BST9 563 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 PAK6Q9NQU5 681 aaPredicted RBP21.71■■□□□ 1.07
CLN6-201ENST00000249806 CATSPERZQ9NTU4 200 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 PCDHGC4Q9Y5F7 938 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 INSIG1O15503 277 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 SKAP2O75563 359 aaPredicted RBP21.71■■□□□ 1.07
CLN6-201ENST00000249806 PRLP01236 227 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 CR2P20023 1033 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 SULT2A1Q06520 285 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 TBL3Q12788 808 aaKnown RBP21.71■■□□□ 1.07
CLN6-201ENST00000249806 ARHGEF6Q15052 776 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 MUM1Q2TAK8 710 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 FAM117BQ6P1L5 589 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 HPS6Q86YV9 775 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 RYBPQ8N488 228 aaPredicted RBP21.71■■□□□ 1.07
CLN6-201ENST00000249806 MDGA1Q8NFP4 955 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 GPR150Q8NGU9 434 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 DNAJC9Q8WXX5 260 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 PEX13Q92968 403 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 ZNF385DQ9H6B1 395 aa21.71■■□□□ 1.07
CLN6-201ENST00000249806 ANAPC1Q9H1A4 1944 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ILVBLA1L0T0 632 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 RGSL1A5PLK6 1076 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 NVLO15381 856 aaKnown RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 CCNT2O60583 730 aaKnown RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 THRAP10827 490 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ARSAP15289 507 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 FDXRP22570 491 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 SP100P23497 879 aaPredicted RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 PPARGP37231 505 aaPredicted RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 ALDH1A3P47895 512 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 BTKQ06187 659 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 RNF219Q5W0B1 726 aaPredicted RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 LINGO4Q6UY18 593 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 CCDC126Q96EE4 140 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ZNF333Q96JL9 665 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 MYRFLQ96LU7 910 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ANKRD27Q96NW4 1050 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 TTC1Q99614 292 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ZBED2Q9BTP6 218 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 CCDC28BQ9BUN5 200 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 YIPF1Q9Y548 306 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 TANC1Q9C0D5 1861 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ANKRD36A6QL64 1941 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 A0A1B0GVM2 712 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 TCAF2A6NFQ2 919 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 ANPEPP15144 967 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 TSPAN8P19075 237 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 PMLP29590 882 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 CLNS1AP54105 237 aaKnown RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 PRMT2P55345 433 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 LAMB3Q13751 1172 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 TCHHL1Q5QJ38 904 aaPredicted RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 CPSF7Q8N684 471 aaKnown RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 OR4K2Q8NGD2 314 aa21.7■■□□□ 1.06
CLN6-201ENST00000249806 KLF16Q9BXK1 252 aaPredicted RBP21.7■■□□□ 1.06
CLN6-201ENST00000249806 MUC3BQ9H195 1237 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms