RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PSMD13Q9UNM6 376 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TLR5O60602 858 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 IMPDH1P20839 514 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 TACR2P21452 398 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 MAPKAPK2P49137 400 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 DUSP4Q13115 394 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 GPR17Q13304 367 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 ZNF235Q14590 738 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 RFTN1Q14699 578 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 FAM45BPQ6NSW5 357 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 CYHR1Q6ZMK1 362 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 SLC22A9Q8IVM8 553 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 OR52K2Q8NGK3 314 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 FAM45AQ8TCE6 357 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 FEM1CQ96JP0 617 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 FAR2Q96K12 515 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 VCX3BQ9H321 246 aa19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 POLR3BQ9NW08 1133 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP1-201ENST00000249014 CCDC189A1A4V9 331 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 CD3EAPO15446 510 aaKnown RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 FDXRP22570 491 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 SLC6A4P31645 630 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 MRPS22P82650 360 aaKnown RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 GALNT1Q10472 559 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ZNF678Q5SXM1 525 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 CLEC6AQ6EIG7 209 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 LGI2Q8N0V4 545 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 PQLC1Q8N2U9 271 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 SPATA17Q96L03 361 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ABT1Q9ULW3 272 aaKnown RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 NT5C1B-RDH14C9J2C7 533 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 GLP2RO95838 553 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 FGF1P05230 155 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ZDHHC11BP0C7U3 371 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 HLA-DPA1P20036 260 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 SLC26A3P40879 764 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ATXN3P54252 364 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 OGFRL1Q5TC84 451 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ABI1Q8IZP0 508 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 L3HYPDHQ96EM0 354 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 NSMCE3Q96MG7 304 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 CASD1Q96PB1 797 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 TRAF6Q9Y4K3 522 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 ASB3Q9Y575 518 aa19.57■□□□□ 0.72
CDC42EP1-201ENST00000249014 TBC1D4O60343 1298 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 SUPT7LO94864 414 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 PRSS56P0CW18 603 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 UQCRBP14927 111 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 CD1DP15813 335 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 HDCP19113 662 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 ME2P23368 584 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 HOXD9P28356 352 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 SLC11A1P49279 550 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 INHBCP55103 352 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 XIAPP98170 497 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 UNC50Q53HI1 259 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 FOXB2Q5VYV0 432 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 TMEM173Q86WV6 379 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 SNX31Q8N9S9 440 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 FAM156AQ8NDB6 213 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 BHLHE22Q8NFJ8 381 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 TRPC7Q9HCX4 862 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 UBDO15205 165 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 TRPA1O75762 1119 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 ATF6P18850 670 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 ALDH1A3P47895 512 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 GRAMD1BQ3KR37 738 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 FUT10Q6P4F1 479 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 APLFQ8IW19 511 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 OR7D4Q8NG98 312 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 GPR150Q8NGU9 434 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 BRSK1Q8TDC3 778 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 EXT2Q93063 718 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 C6orf203Q9P0P8 240 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 PCDHGA7Q9Y5G6 932 aa19.56■□□□□ 0.72
CDC42EP1-201ENST00000249014 F5H5T6 163 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 FBP2O00757 339 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 ACOT8O14734 319 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 PEX1O43933 1283 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 RPP40O75818 363 aaKnown RBP19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 MT-CO1P00395 513 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 EPOP01588 193 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 ALDH2P05091 517 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 TCN1P20061 433 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 PTK2BQ14289 1009 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 GPNMBQ14956 572 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 TAS1R1Q7RTX1 841 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 RYBPQ8N488 228 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 AFAP1L2Q8N4X5 818 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 PCDH20Q8N6Y1 951 aaKnown RBP19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 PEX13Q92968 403 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 TRIB3Q96RU7 358 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 CCDC167Q9P0B6 97 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 ANKRD36A6QL64 1941 aa19.55■□□□□ 0.72
CDC42EP1-201ENST00000249014 A0A1W2PQ45 241 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP1-201ENST00000249014 A0A1W2PQY0 241 aa19.54■□□□□ 0.72
CDC42EP1-201ENST00000249014 MOXD2PA6NHM9 499 aa19.54■□□□□ 0.72
CDC42EP1-201ENST00000249014 ENPP3O14638 875 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms