RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TMEM65Q6PI78 240 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 XKRXQ6PP77 449 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 CPNE9Q8IYJ1 553 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 SLFN12Q8IYM2 578 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 SYCE1Q8N0S2 351 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 ABHD11Q8NFV4 315 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 OR52K2Q8NGK3 314 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 UTP15Q8TED0 518 aaKnown RBP5.73□□□□□ -1.49
RFX4-201ENST00000229387 UFD1Q92890 307 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 MYDGFQ969H8 173 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 CLPTM1LQ96KA5 538 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 AGAP4Q96P64 663 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 CBWD1Q9BRT8 395 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 BCL2L14Q9BZR8 327 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
RFX4-201ENST00000229387 MAGEF1Q9HAY2 307 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 IFT46Q9NQC8 304 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 KCNH7Q9NS40 1196 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 EXTL2Q9UBQ6 330 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 RIMS3Q9UJD0 308 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 PCDHB11Q9Y5F2 797 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 RAD54BQ9Y620 910 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 ASTN1O14525 1302 aa5.73□□□□□ -1.49
RFX4-201ENST00000229387 A0A0A6YYK5 440 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 A0A1B0GTQ1 180 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 K7ENM7 598 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 SLC16A4O15374 487 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 TGFB1I1O43294 461 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 MFN2O95140 757 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ARIH2O95376 493 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 PTTG1O95997 202 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 F2P00734 622 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 HSMCR30P0CW71 290 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 MCF2P10911 925 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 NCF2P19878 526 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 CHRNA3P32297 505 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 TRHRP34981 398 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 RPL21P46778 160 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 TNFAIP2Q03169 654 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 PLD1Q13393 1074 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 KRR1Q13601 381 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 MLC1Q15049 377 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 UGCGQ16739 394 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CLEC16AQ2KHT3 1053 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ZFP69Q49AA0 526 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 FAM76BQ5HYJ3 339 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RABGAP1LQ5R372 815 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 UBAP2Q5T6F2 1119 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 PRMT9Q6P2P2 845 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 GPRIN3Q6ZVF9 776 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ZNF438Q7Z4V0 828 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 TRABD2AQ86V40 505 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ZC3H7AQ8IWR0 971 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 PARP8Q8N3A8 854 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ST13P5Q8NFI4 369 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 SETD7Q8WTS6 366 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 RAB2BQ8WUD1 216 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 PTP4A1Q93096 173 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RAB7BQ96AH8 199 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ARHGEF26Q96DR7 871 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RNF170Q96K19 258 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 C12orf57Q99622 126 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 TMEM120AQ9BXJ8 343 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CDC42EP4Q9H3Q1 356 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 NCOR1P1Q9H4R4 102 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 POLR3BQ9NW08 1133 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 TAS2R14Q9NYV8 317 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 SRRDQ9UH36 339 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 SNX24Q9Y343 169 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CBY1Q9Y3M2 126 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RREB1Q92766 1687 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 LAMA3Q16787 3333 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 A0A1W2PRG6 482 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CYP26A1O43174 497 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 FAM189A1O60320 539 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 GMDSO60547 372 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 YES1P07947 543 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 CYP11B1P15538 503 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ZNF182P17025 639 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 PRIM2P49643 509 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 STARP49675 285 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RPS6P62753 249 aaKnown RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 FLI1Q01543 452 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 IFRD2Q12894 506 aaPredicted RBP5.72□□□□□ -1.49
RFX4-201ENST00000229387 ERV3-1Q14264 604 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 GALEQ14376 348 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 FAM102BQ5T8I3 360 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 C1orf53Q5VUE5 145 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 RNF180Q86T96 592 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 HORMAD1Q86X24 394 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ZNF276Q8N554 614 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 NKAIN3Q8N8D7 197 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 GRK7Q8WTQ7 553 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 GTF2H4Q92759 462 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 FBXW5Q969U6 566 aa5.72□□□□□ -1.49
RFX4-201ENST00000229387 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms