RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 JCHAINP01591 159 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 CCNA2P20248 432 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 CDH3P22223 829 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 STX1BP61266 288 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 ATP1A4Q13733 1029 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 FAM83EQ2M2I3 478 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 C9orf57Q5W0N0 161 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 APOBEC3FQ8IUX4 373 aaKnown RBP14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 SLC15A4Q8N697 577 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 CHST12Q9NRB3 414 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 RIC8BQ9NVN3 520 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 EGFL7Q9UHF1 273 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 ITGB1BP2Q9UKP3 347 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 NDUFAF1Q9Y375 327 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 CENPFP49454 3210 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 A0A0J9YYE9 177 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 J3QRK9 145 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 USP2O75604 605 aaPredicted RBP14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 GPIP06744 558 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 FCGR1AP12314 374 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 OTOP3Q7RTS5 596 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 ZC3H7AQ8IWR0 971 aaKnown RBP14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 FBXL8Q96CD0 374 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 ARMC7Q9H6L4 198 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 CMTM6Q9NX76 183 aa14.04□□□□□ -0.16
SCNN1A-201ENST00000228916 NOL3O60936 208 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 GFAPP14136 432 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 CPB1P15086 417 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 JUNBP17275 347 aaPredicted RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 MATN1P21941 496 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 TRAF2Q12933 501 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 POU6F1Q14863 301 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 NR1D2Q14995 579 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 NEDD8Q15843 81 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 RGS21Q2M5E4 152 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 CCNYL2Q5T2Q4 361 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 HFE2Q6ZVN8 426 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 PDPRQ8NCN5 879 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 BEST2Q8NFU1 509 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 CAMKK2Q96RR4 588 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 TUT1Q9H6E5 874 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 SNTG2Q9NY99 539 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 ATP6AP2A0A1C7CYW4 349 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 ARPC2O15144 300 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 ATP6AP2O75787 350 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 MT-CO1P00395 513 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 FYNP06241 537 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 RFC2P35250 354 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 POLR2IP36954 125 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 RXRGP48443 463 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 NDUFV1P49821 464 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 PLK1P53350 603 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 SLC12A2P55011 1212 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 ADARB1P78563 741 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 AGAP9Q5VTM2 703 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 FAM219BQ5XKK7 198 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 CLEC6AQ6EIG7 209 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 DENND5AQ6IQ26 1287 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 CCDC117Q8IWD4 279 aaPredicted RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 DDIASQ8IXT1 998 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 C19orf60Q96EN9 201 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 SLX1AQ9BQ83 275 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 C1orf50Q9BV19 199 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 DUSP16Q9BY84 665 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 GID8Q9NWU2 228 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 TRNAU1APQ9NX07 287 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 PKD2L2Q9NZM6 624 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 FBXO5Q9UKT4 447 aa14.03□□□□□ -0.16
SCNN1A-201ENST00000228916 NR5A2O00482 541 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 SEC14L2O76054 403 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 CAPN3P20807 821 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 SLC6A2P23975 617 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 MAP4P27816 1152 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 RPS9P46781 194 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 UGT3A2Q3SY77 523 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 SPATS1Q496A3 300 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 ZNF470Q6ECI4 717 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 ZNF773Q6PK81 442 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 SLC22A9Q8IVM8 553 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 IL1RL2Q9HB29 575 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 TREX1Q9NSU2 369 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 IFT80Q9P2H3 777 aaPredicted RBP14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 SLC2A6Q9UGQ3 507 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 FBXW11Q9UKB1 542 aa14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 AAR2Q9Y312 384 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-201ENST00000228916 POLR2AP24928 1970 aaKnown RBP14.02□□□□□ -0.17
SCNN1A-201ENST00000228916 TMEM247A6NEH6 219 aa14.02□□□□□ -0.17
SCNN1A-201ENST00000228916 CFAP99D6REC4 459 aa14.02□□□□□ -0.17
SCNN1A-201ENST00000228916 LGALS2P05162 132 aa14.02□□□□□ -0.17
SCNN1A-201ENST00000228916 RBP1P09455 135 aa14.02□□□□□ -0.17
SCNN1A-201ENST00000228916 LTA4HP09960 611 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms