RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 USP18Q9UMW8 372 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PLLPQ9Y342 182 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 TCAF1Q9Y4C2 921 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 TEX51A0A1B0GUA7 166 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 C12orf71A8MTZ7 269 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 USP12O75317 370 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 BCAS2O75934 225 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 MYL4P12829 197 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 MYF6P23409 242 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 C16orf89Q6UX73 402 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 SNX32Q86XE0 403 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PHTF2Q8N3S3 785 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 LEMD2Q8NC56 503 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 KCTD6Q8NC69 237 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PIWIL2Q8TC59 973 aaKnown RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 CSF3RQ99062 836 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 SLC13A1Q9BZW2 595 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 IPO11Q9UI26 975 aaKnown RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 C2CD4BA6NLJ0 364 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 CYB561D2O14569 222 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SLC9A3R1O14745 358 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 NDUFS2O75306 463 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 RBL1P28749 1068 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 NUDT2P50583 147 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 HK2P52789 917 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 TRIM32Q13049 653 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SNTA1Q13424 505 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 HIF1AQ16665 826 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 DCAF4L1Q3SXM0 396 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 OR6B2Q6IFH4 312 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 METTL2BQ6P1Q9 378 aaKnown RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 PRR23BQ6ZRT6 265 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 TCAIMQ8N3R3 496 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 LILRB2Q8N423 598 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ANKRD53Q8N9V6 530 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 CDKL2Q92772 493 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ATP6V1E2Q96A05 226 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 PTPN18Q99952 460 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 KCNN2Q9H2S1 579 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SERHL2Q9H4I8 314 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ASNSD1Q9NWL6 643 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SHOC2Q9UQ13 582 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 MEN1O00255 615 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 AIM2O14862 343 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 KCNK2O95069 426 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GSNP06396 782 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GFAPP14136 432 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ATF4P18848 351 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GPD1P21695 349 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ARNTP27540 789 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GRIK1P39086 918 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GAD2Q05329 585 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 CLVS2Q5SYC1 327 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 TRAF7Q6Q0C0 670 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 CTAGE3PQ8IX95 158 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GALNT12Q8IXK2 581 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 SAMD14Q8IZD0 417 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 BPIFB6Q8NFQ5 453 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 ANKRD49Q8WVL7 239 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 PIK3R3Q92569 461 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 FAM124BQ9H5Z6 455 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-201ENST00000220429 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 NUP50Q9UKX7 468 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 HES2Q9Y543 173 aa13.67□□□□□ -0.22
GABPB1-201ENST00000220429 OR5K4A6NMS3 321 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 FAM25AB3EWG3 89 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 FAM25CB3EWG5 89 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 FAM25GB3EWG6 89 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 RAD51BO15315 384 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 DCXO43602 365 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 GPR32O75388 356 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 DAB1O75553 588 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 GRAP2O75791 330 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 NTRK1P04629 796 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 HCAR3P49019 387 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 RGS7P49802 495 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 PKNOX1P55347 436 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 GOLGA7BQ2TAP0 167 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
GABPB1-201ENST00000220429 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms