RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ap4s1Q9WVL1 144 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Adamts14E9PX39 1209 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc9a3G3X939 829 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Pknox1O70477 436 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 P01641 117 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc6a13P31649 602 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Aldh3a1P47739 453 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rab10P61027 200 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Aarsd1Q3THG9 412 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 GpamQ61586 827 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Hspa1aQ61696 641 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dlx3Q64205 287 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Sarm1Q6PDS3 724 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ssx9Q6XAS3 170 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Kctd13Q8BGV7 329 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slfn5Q8CBA2 884 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem30aQ8VEK0 364 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Snx9Q91VH2 595 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Stx12Q9ER00 274 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Oxct2bQ9ESL0 520 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc29a1Q9JIM1 460 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Oxct2aQ9JJN4 520 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 PrelpQ9JK53 378 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 Copg1Q9QZE5 874 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 RecqlQ9Z129 648 aa18.38■□□□□ 0.53
Trim47-202ENSMUST00000106441 4930426L09RikE9Q0N7 123 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 BC024978J3QPC3 361 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 CrymO54983 313 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Afap1l2Q5DTU0 825 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ndrg1Q62433 394 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem198Q8BG75 360 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nup93Q8BJ71 819 aaKnown RBP18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc41a1Q8BJA2 512 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Spdye4bQ8CDE8 236 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc30a5Q8R4H9 761 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Znf24Q91VN1 368 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dhrs1Q99L04 313 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Clic3Q9D7P7 237 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cacng3Q9JJV5 315 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 NbnQ9R207 751 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Scn5aQ9JJV9 2019 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tnip3A0A1D5RMN0 279 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dcpp3L7N259 170 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Oaz2O08608 189 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 P01648 108 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tlx1P43345 332 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dpf3P58269 378 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 B3gntl1Q3U129 357 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Lsg1Q3UM18 644 aaKnown RBP18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Q6GQU0 248 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nmur2Q8BZ39 395 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Atg14Q8CDJ3 492 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nkiras1Q8CEC5 192 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem161aQ8VCA6 480 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nsmce2Q91VT1 247 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Golm1Q91XA2 393 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Chit1Q9D7Q1 464 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 1700080O16RikQ9D9G4 284 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 Hmgn3Q9DCB1 99 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 CenpkQ9ESN5 271 aa18.37■□□□□ 0.53
Trim47-202ENSMUST00000106441 CitP49025 2055 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Wdr49A0A0N4SUK7 710 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Calhm3J3QMI4 347 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Phkg1P07934 388 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Itgb1P09055 798 aaKnown RBP18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 RapsnP12672 412 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mthfd2P18155 350 aaKnown RBP18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Wdr36Q3TAQ9 899 aaKnown RBP18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slfn4Q3UV66 602 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Nrg1Q6DR99 700 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Slc39a14Q75N73 489 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tas2r115Q7M719 310 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Dyrk4Q8BI55 632 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem154Q8C4Q9 181 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gfm2Q8R2Q4 779 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Rnf111Q99ML9 989 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 KlbQ99N32 1043 aa18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 GatmQ9D964 423 aaKnown RBP18.36■□□□□ 0.53
Trim47-202ENSMUST00000106441 Vmn2r74E9PW21 853 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Vmn2r96E9PZU5 664 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cyp4f17G3UW78 524 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Cyp2b19O55071 492 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Htr2cP34968 459 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Gabrb3P63080 473 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Traf6P70196 530 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Grm5Q3UVX5 1203 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmed1Q3V009 227 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fam71bQ5STT6 665 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Mfsd3Q5U419 412 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ip6k1Q6PD10 433 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Fndc11Q80WB0 326 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ric8bQ80XE1 520 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tmem209Q8BRG8 561 aaKnown RBP18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tceal5Q8CCT4 200 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Zbtb6Q8K088 423 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Prrg2Q8R182 198 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Ccdc71Q8VEG0 433 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Lypd3Q91YK8 363 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 DeraQ91YP3 318 aa18.35■□□□□ 0.53
Trim47-202ENSMUST00000106441 Tcf7l2Q924A0 459 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms