RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Sbk1Q8QZX0 417 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Impg1Q8R1W8 798 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ero1bQ8R2E9 467 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Zfp61Q923D1 555 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Fam96aQ9DCL2 160 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 NhsB1AV60 1647 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Vmn1r2A2AMT6 306 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Smim22J3QP37 91 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ctbp1O88712 441 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 LgmnO89017 435 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mboat4P0C7A3 435 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 AladP10518 330 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PfklP12382 780 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cdh9P70407 786 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Bcar1Q61140 874 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 March4Q80TE3 409 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Snrnp25Q8VIK1 123 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Vwa7Q9JHA8 891 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Fbxo16Q9QZM9 334 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mroh5E9PUJ8 762 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm6337K7N6X9 211 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm3115L7N285 211 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pitpnm1O35954 1243 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pnpla5Q32LZ8 432 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Fam173bQ9D1Z3 247 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Chst7Q9EP78 484 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 CtsmQ9JL96 333 aa23.2■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Dhx15O35286 795 aaKnown RBP23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Pcbp1P60335 356 aaKnown RBP23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mfsd14aP70187 490 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Fbxo30Q8BJL1 746 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ptrh1Q8BW00 204 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Txndc11Q8K2W3 948 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Vwa1Q8R2Z5 415 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Grpel2O88396 224 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 R3hdm4Q4VBF2 262 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Itga2Q62469 1178 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Dcp2Q9CYC6 422 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 GarsQ9CZD3 729 aaKnown RBP23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lsm12Q9D0R8 195 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Dennd6bQ9D9V7 585 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lypla2Q9WTL7 231 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mapk12O08911 367 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Dgcr6O35347 198 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Cxcr3O88410 367 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Cd44P15379 778 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hk3Q3TRM8 922 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mapk10Q61831 464 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 PapolgQ6PCL9 739 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Rad9bQ6WBX7 403 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Slc26a5Q99NH7 744 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ppil2Q9D787 521 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Sh2b2Q9JID9 621 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Aldh9a1Q9JLJ2 494 aa23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ehd1Q9WVK4 534 aaKnown RBP23.2■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 TgfbiP82198 683 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 ChatQ03059 641 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 IdsQ08890 552 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Tbc1d17Q8BYH7 645 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Klhl35Q9CZ49 574 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Zscan5bB2RTN3 468 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ildr2B5TVM2 661 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 AcadlP51174 430 aaKnown RBP23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ndst1Q3UHN9 882 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Dennd1aQ8K382 1016 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gpn3Q9D3W4 284 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 IcmtQ9EQK7 283 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 H2-Q1O19441 368 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Muc3aQ3U5A2 218 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gm6377Q8BHV4 303 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Aqp12Q8CHJ2 290 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Prl2c5Q9JLV9 222 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gm45233A0A0N4SVE0 221 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Npy2rP97295 381 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mgat3Q10470 538 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Zfp935Q14DI0 353 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Maml1Q6T264 1020 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 4930503B20RikQ80ZP0 234 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Tmem161bQ8C2L6 487 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Kctd2Q8CEZ0 266 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 TrhdeQ8K093 1025 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lrrc34Q9DAM1 415 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 TesminQ9WTJ6 475 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Smim17A0A504 109 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 CaskO70589 926 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 GmpsQ3THK7 693 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Grik1Q60934 836 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Atp6v1c2Q99L60 427 aa23.19■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Zfp990B1AVN5 605 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 PenkP22005 268 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Aldh3a2P47740 484 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Thoc7Q7TMY4 204 aaKnown RBP23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Olfr813Q7TRH5 310 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Bnc2Q8BMQ3 1127 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Slc5a9Q8VDT1 685 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Vmn2r70K7N702 854 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 EnpepP16406 945 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Shox2P70390 331 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Tmem45aQ60774 273 aa23.18■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Styk1Q6J9G1 429 aa23.18■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms