RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PDCD6IPQ8WUM4 868 aaKnown RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 TLE6Q9H808 572 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 SPHK2Q9NRA0 654 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 HACD3Q9P035 362 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 MYOFQ9NZM1 2061 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 CCT8L1PA6NM43 557 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 SLC9A3R1O14745 358 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 TGDSO95455 350 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 APOA4P06727 396 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 SAT1P21673 171 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 HLA-FP30511 346 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 MAGEA10P43363 369 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 FASTKD1Q53R41 847 aaKnown RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 PITRM1Q5JRX3 1037 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 TRPM8Q7Z2W7 1104 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 ARID3BQ8IVW6 561 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 RIN3Q8TB24 985 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 ELMO2Q96JJ3 720 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 LMLNQ96KR4 655 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 LMAN2LQ9H0V9 348 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 KDM4CQ9H3R0 1056 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 FBXO6Q9NRD1 293 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 MID2Q9UJV3 735 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 INTS6Q9UL03 887 aaKnown RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 ACOT9Q9Y305 439 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 NUP210Q8TEM1 1887 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 PDE4DIPQ5VU43 2346 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 ANKRD65E5RJM6 399 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 K7ERQ8 282 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 FZD6O60353 706 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 GOT2P00505 430 aaKnown RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 CEBPBP17676 345 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 PSMA3P25788 255 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 GRIA4P48058 902 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 ZNF140P52738 457 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 IRX4P78413 519 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 ATXN7L2Q5T6C5 722 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 CNSTQ6PJW8 725 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 ADGRD2Q7Z7M1 963 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 SLC41A1Q8IVJ1 513 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 MDGA1Q8NFP4 955 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 OR4L1Q8NH43 312 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 SCG3Q8WXD2 468 aaKnown RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 SMG7Q92540 1137 aaKnown RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 CDKN2AIPNLQ96HQ2 116 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 C7orf26Q96N11 449 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 TRIM55Q9BYV6 548 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 TM6SF2Q9BZW4 377 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 YBX2Q9Y2T7 364 aaKnown RBP16.49■□□□□ 0.23
PHGDH-216ENST00000641375 SPO11Q9Y5K1 396 aa16.49■□□□□ 0.23
PHGDH-216ENST00000641375 CD3EAPO15446 510 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SMAD6O43541 496 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 IGSF6O95976 241 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 GSRP00390 522 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SLC35E2BP0CK96 405 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 LPOP22079 712 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 ALDH3A1P30838 453 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 EPHB1P54762 984 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 RPL26P61254 145 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 BST1Q10588 318 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 ARMC12Q5T9G4 340 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SDCCAG8Q86SQ7 713 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 KIAA1958Q8N8K9 716 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 PPP1R14CQ8TAE6 165 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SREK1Q8WXA9 508 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 CCT6BQ92526 530 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 ISG20Q96AZ6 181 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 TSPAN17Q96FV3 270 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 ZSWIM3Q96MP5 696 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 NMRAL1Q9HBL8 299 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 CATSPERZQ9NTU4 200 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 CORO1CQ9ULV4 474 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 RPL26L1Q9UNX3 145 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 HS3ST2Q9Y278 367 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 PCDHB9Q9Y5E1 797 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 USH1CQ9Y6N9 552 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 ATG2AQ2TAZ0 1938 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 TRANK1O15050 2925 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 A0A087X1B8 175 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 CCL22O00626 93 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 BUD23O43709 281 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SOCS5O75159 536 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 PAPLNO95428 1278 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 S1PR4O95977 384 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 TYRP14679 529 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 HOXB8P17481 243 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 OGNP20774 298 aaKnown RBP16.48■□□□□ 0.23
PHGDH-216ENST00000641375 IRF9Q00978 393 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 SULT2A1Q06520 285 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 BCL2L1Q07817 233 aa16.48■□□□□ 0.23
PHGDH-216ENST00000641375 DMC1Q14565 340 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms