RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NKAIN2Q5VXU1 208 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SPECC1LQ69YQ0 1117 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 RRAGAQ7L523 313 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TFAP2DQ7Z6R9 452 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TRIM59Q8IWR1 403 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 DCAF4L2Q8NA75 395 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 NETO2Q8NC67 525 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 FAM46DQ8NEK8 389 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 OR6C4Q8NGE1 309 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 LMO3Q8TAP4 145 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 GPBAR1Q8TDU6 330 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SCG3Q8WXD2 468 aaKnown RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 ART4Q93070 314 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 PDXPQ96GD0 296 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 CCDC74BQ96LY2 380 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SLC2A13Q96QE2 648 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 RBM15Q96T37 977 aaKnown RBP eCLIP9.8□□□□□ -0.844e-7■■■□□ 17.3
PHGDH-212ENST00000641247 SPON2Q9BUD6 331 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TM6SF2Q9BZW4 377 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM9Q9P0T7 183 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 PILRAQ9UKJ1 303 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 OR1A2Q9Y585 309 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 MRPS18BQ9Y676 258 aaKnown RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 CACNA1DQ01668 2161 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM202A6NGA9 273 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 M0QYT0 321 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 PES1O00541 588 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 NEMP1O14524 444 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 TM7SF2O76062 418 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 RASGRP1O95267 797 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 CPNE6O95741 557 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 IVLP07476 585 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 FURINP09958 794 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 CALRP27797 417 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 BLKP51451 505 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 MAZP56270 477 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 GSDMDP57764 484 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 YWHAEP62258 255 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 NME3Q13232 169 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 INPP5AQ14642 412 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 EIF2S3LQ2VIR3 472 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 C14orf28Q4W4Y0 310 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 ZNF805Q5CZA5 627 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 DCAF17Q5H9S7 520 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 FKBP15Q5T1M5 1219 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 TCERG1LQ5VWI1 586 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 C1QL3Q5VWW1 255 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 ANKS6Q68DC2 871 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 C16orf46Q6P387 395 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 PIM3Q86V86 326 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 ARHGEF19Q8IW93 802 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 PCDH20Q8N6Y1 951 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 TEX19Q8NA77 164 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 APOBEC4Q8WW27 367 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 OR1E3Q8WZA6 343 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 SLC35C1Q96A29 364 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 RNF31Q96EP0 1072 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 KREMEN1Q96MU8 473 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 KLHL32Q96NJ5 620 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 APOOQ9BUR5 198 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 CEP44Q9C0F1 390 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM168Q9H0V1 697 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 NDST4Q9H3R1 872 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 KCND1Q9NSA2 647 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 SPATS2LQ9NUQ6 558 aaKnown RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 FAM53CQ9NYF3 392 aa9.79□□□□□ -0.84
PHGDH-212ENST00000641247 ARMCX3Q9UH62 379 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.79□□□□□ -0.84
PHGDH-212ENST00000641247 TRPM6Q9BX84 2022 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 FBN2P35556 2912 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 SPTBN1Q01082 2364 aaKnown RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 B4DGG1 531 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 NUDT21O43809 227 aaKnown RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 VPS4BO75351 444 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 UGT2B4P06133 528 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 SLC2A3P11169 496 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TIMP2P16035 220 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TBXAS1P24557 533 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ELAVL4P26378 380 aaKnown RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ALDH4A1P30038 563 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ACVRL1P37023 503 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ACADSBP45954 432 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 PEX5P50542 639 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 CDK17Q00537 523 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TBX2Q13207 712 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ARHGEF7Q14155 803 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 NFATC4Q14934 902 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 STILQ15468 1287 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 MAP9Q49MG5 647 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 LEKR1Q6ZMV7 388 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TAF8Q7Z7C8 310 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 SETD3Q86TU7 594 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms