RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ILF2Q12905 390 aaKnown RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 ORC1Q13415 861 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PTPN20Q4JDL3 420 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 SPATA31D4Q6ZUB0 917 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TTC30AQ86WT1 665 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 JAMLQ86YT9 394 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ARID3BQ8IVW6 561 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 C3orf58Q8NDZ4 430 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 OSCP1Q8WVF1 389 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 MYLIPQ8WY64 445 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 DNASE1L2Q92874 299 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 NCLNQ969V3 563 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ZBTB18Q99592 522 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TMEM120AQ9BXJ8 343 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 CDH19Q9H159 772 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PCSK1NQ9UHG2 260 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PLCL2Q9UPR0 1127 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TLR6Q9Y2C9 796 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ZNF840PA6NDX5 716 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 CCDC182A6NF36 153 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PIK3R2O00459 728 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 CLDN5O00501 218 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SNX3O60493 162 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 CCNKO75909 580 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PORP16435 677 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 CPA2P48052 419 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 RPL26P61254 145 aaKnown RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 SLC7A9P82251 487 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TRAF3Q13114 568 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SLC29A2Q14542 456 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 RASA2Q15283 850 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 HSF5Q4G112 596 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 PM20D1Q6GTS8 502 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TMEM184AQ6ZMB5 413 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ZNF662Q6ZS27 426 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 C16orf62Q7Z3J2 963 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 RYBPQ8N488 228 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 CHCHD4Q8N4Q1 142 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 EXD1Q8NHP7 514 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ENKURQ8TC29 256 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SH3RF2Q8TEC5 729 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 GANCQ8TET4 914 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 DLG3Q92796 817 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PDCD10Q9BUL8 212 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 FRMD8Q9BZ67 464 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 MAGEB5Q9BZ81 275 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 MUC3BQ9H195 1237 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 C20orf96Q9NUD7 363 aaPredicted RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 ADAM30Q9UKF2 790 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 RAB23Q9ULC3 237 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 VPS4AQ9UN37 437 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SOX13Q9UN79 622 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ING4Q9UNL4 249 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 F8W810 466 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 THRAP10827 490 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ALOX12P18054 663 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PBX2P40425 430 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 NR2C2P49116 596 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PDIA2Q13087 525 aaKnown RBP5.71□□□□□ -1.5
RTTN-218ENST00000640408 C6orf10Q5SRN2 563 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 MPP7Q5T2T1 576 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PMF1Q6P1K2 205 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 LIMS2Q7Z4I7 341 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 SMYD1Q8NB12 490 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 EDEM1Q92611 657 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 CNDP1Q96KN2 507 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 TMEM237Q96Q45 408 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ZYG11BQ9C0D3 744 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 ZDHHC4Q9NPG8 344 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 AASDHPPTQ9NRN7 309 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 PNPLA3Q9NST1 481 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
RTTN-218ENST00000640408 TRIM10Q9UDY6 481 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 DNPEPQ9ULA0 475 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 NCKAP1Q9Y2A7 1128 aa5.71□□□□□ -1.5
RTTN-218ENST00000640408 A0A1W2PQH9 124 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 RGS5O15539 181 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 CYP1A2P05177 515 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 IRF1P10914 325 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 ENO3P13929 434 aaPredicted RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 RHOQP17081 205 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 STIP1P31948 543 aaKnown RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 HOXD12P35452 270 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 AFF1P51825 1210 aaKnown RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 RAD23AP54725 363 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 TRADDQ15628 312 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 SLC45A4Q5BKX6 768 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 ZC3H12BQ5HYM0 836 aaKnown RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 KLHL17Q6TDP4 642 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 CYP4V2Q6ZWL3 525 aaPredicted RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 TMCO2Q7Z6W1 182 aaPredicted RBP5.7□□□□□ -1.5
RTTN-218ENST00000640408 PRUNE1Q86TP1 453 aa5.7□□□□□ -1.5
RTTN-218ENST00000640408 FAM131BQ86XD5 332 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms