RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PLXND1Q9Y4D7 1925 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 LOC285095A0A1B0GVY8 99 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 A0A1W2PPC4 97 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 GOLGA8CPA6NN73 597 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ANKRD66B4E2M5 251 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 PROB1E7EW31 1015 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 SLC31A1O15431 190 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 LATO43561 262 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 USP12O75317 370 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 EPN2O95208 641 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 NDST3O95803 873 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ATXN1LP0C7T5 689 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 PIRTP0C851 137 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 CYP2A6P11509 494 aaPredicted RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 VIPR1P32241 457 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ADRA1AP35348 466 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 GRIA4P48058 902 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 FNTAP49354 379 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 LIG3P49916 1009 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 RPS21P63220 83 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 CCDC6Q16204 474 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ZNF284Q2VY69 593 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 WDR45BQ5MNZ6 344 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 LAIR1Q6GTX8 287 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 NEK5Q6P3R8 708 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 CRTC1Q6UUV9 634 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 LIPIQ6XZB0 460 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 USP45Q70EL2 814 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 CYP2U1Q7Z449 544 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 PIGKQ92643 395 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 MYOCQ99972 504 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 FSD1LQ9BXM9 530 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ADGRE3Q9BY15 652 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 MIR1-1HGQ9H1L0 117 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ARRDC1-AS1Q9H2J1 176 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 SEMA4AQ9H3S1 761 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 PAK5Q9P286 719 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 AAR2Q9Y312 384 aaKnown RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
GTF3A-209ENST00000640289 USP34Q70CQ2 3546 aa13.25□□□□□ -0.29
GTF3A-209ENST00000640289 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 FANCMQ8IYD8 2048 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 CAPN8A6NHC0 703 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 KIF2AO00139 706 aaPredicted RBP13.24□□□□□ -0.29
GTF3A-209ENST00000640289 WNT9AO14904 365 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
GTF3A-209ENST00000640289 CLDN7O95471 211 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 PAK4O96013 591 aaPredicted RBP13.24□□□□□ -0.29
GTF3A-209ENST00000640289 KRT14P02533 472 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 TUBB4AP04350 444 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 C6P13671 934 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 GM2AP17900 193 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 CD27P26842 260 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 FDFT1P37268 417 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 VPS41P49754 854 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 TERF1P54274 439 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 LMNB2Q03252 620 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 SLC1A5Q15758 541 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 CNGA3Q16281 694 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 SIRPB2Q5JXA9 342 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 LRRC66Q68CR7 880 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 KCTD11Q693B1 232 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 NDUFAF2Q8N183 169 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 ZCCHC9Q8N567 271 aaKnown RBP13.24□□□□□ -0.29
GTF3A-209ENST00000640289 DNASE2BQ8WZ79 361 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 TBL1YQ9BQ87 522 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 C1QTNF2Q9BXJ5 285 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 SLC17A9Q9BYT1 436 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 SMOC1Q9H4F8 434 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 NEU2Q9Y3R4 380 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 SPO11Q9Y5K1 396 aa13.24□□□□□ -0.29
GTF3A-209ENST00000640289 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 CCDC188H7C350 402 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 RAD51BO15315 384 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
GTF3A-209ENST00000640289 TM7SF2O76062 418 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 AP2A1O95782 977 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 EPOP01588 193 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 C1SP09871 688 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 HLA-DPA1P20036 260 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 NFKBIAP25963 317 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 DEKP35659 375 aaKnown RBP13.23□□□□□ -0.29
GTF3A-209ENST00000640289 MPLP40238 635 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 PTGIRP43119 386 aa13.23□□□□□ -0.29
GTF3A-209ENST00000640289 BASP1P80723 227 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms