RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 OSBPL10Q9BXB5 764 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ABCB6Q9NP58 842 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 HPS4Q9NQG7 708 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PISDQ9UG56 409 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TBK1Q9UHD2 729 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SHPRHQ149N8 1683 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ATXN2Q99700 1313 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 RFXAPO00287 272 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 NOL4O94818 638 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TACR2P21452 398 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ATP5A1P25705 553 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 AP1S1P61966 158 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 DSG2Q14126 1118 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 RCAN2Q14206 197 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CRY1Q16526 586 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 KIAA2013Q8IYS2 634 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ICA1LQ8NDH6 482 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 IRGQQ8WZA9 623 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SERPINB12Q96P63 405 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 IL1RAPL1Q9NZN1 696 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ENOPH1Q9UHY7 261 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 C4BP0C0L5 1744 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 MKRN2OSH3BPM6 223 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 POLR1CO15160 346 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 WBP4O75554 376 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SPAG6O75602 509 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 DCTN3O75935 186 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CYP1A1P04798 512 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ITGB5P18084 799 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 POTEHQ6S545 545 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CMTM8Q8IZV2 173 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 OR6K2Q8NGY2 324 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 GOT1L1Q8NHS2 421 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF507Q8TCN5 953 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CYB5D2Q8WUJ1 264 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 STARD8Q92502 1023 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SEC14L1Q92503 715 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TOP1MTQ969P6 601 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 S100A13Q99584 98 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CPEB1Q9BZB8 566 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PCBD2Q9H0N5 130 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SMYD3Q9H7B4 428 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SDHAF3Q9NRP4 125 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 XPO7Q9UIA9 1087 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 GGA2Q9UJY4 613 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 DCNP07585 359 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 DLDP09622 509 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 OTX2P32243 289 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 RAD23AP54725 363 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ARG2P78540 354 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 NFATC2Q13469 925 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 HSF5Q4G112 596 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TCHHL1Q5QJ38 904 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM240Q5SV17 173 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TMEM63BQ5T3F8 832 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 IL31RAQ8NI17 732 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 C7orf43Q8WVR3 580 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 BTBD6Q96KE9 485 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SH3GL2Q99962 352 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 MAGEH1Q9H213 219 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 GANQ9H2C0 597 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 TRABDQ9H4I3 376 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PRKAB1Q9Y478 270 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PCDHGC5Q9Y5F6 944 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 HCFC2Q9Y5Z7 792 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 MRPL42Q9Y6G3 142 aaKnown RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 WNT9AO14904 365 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 DAB1O75553 588 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 IFNA14P01570 189 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PFKLP17858 780 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 IL12BP29460 328 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 PREPP48147 710 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ARSIQ5FYB1 569 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 LDLRAP1Q5SW96 308 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ADGRF1Q5T601 910 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SLC9A4Q6AI14 798 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SLC29A4Q7RTT9 530 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CYP4Z1Q86W10 505 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 FSTL5Q8N475 847 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 B3GALT6Q96L58 329 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SH3GL1Q99961 368 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ILKAPQ9H0C8 392 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ADNPQ9H2P0 1102 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ANKHQ9HCJ1 492 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 CATSPERZQ9NTU4 200 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 SLC6A14Q9UN76 642 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 STK38LQ9Y2H1 464 aa5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ARIH1Q9Y4X5 557 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-218ENST00000640036 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-218ENST00000640036 MYH1P12882 1939 aa5.03□□□□□ -1.6
SCN1A-218ENST00000640036 ANGPT2O15123 496 aa5.03□□□□□ -1.6
SCN1A-218ENST00000640036 BCAT2O15382 392 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-218ENST00000640036 CDC40O60508 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCN1A-218ENST00000640036 SMNDC1O75940 238 aaKnown RBP eCLIP5.03□□□□□ -1.6
SCN1A-218ENST00000640036 KCNA3P22001 575 aa5.03□□□□□ -1.6
SCN1A-218ENST00000640036 SLC7A1P30825 629 aa5.03□□□□□ -1.6
SCN1A-218ENST00000640036 SERPINB4P48594 390 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms