RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 AFF4Q9UHB7 1163 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 TBX10O75333 385 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 ZMPSTE24O75844 475 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 STC2O76061 302 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 GLP2RO95838 553 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 JUNP05412 331 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 KCNA5P22460 613 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 PRDX6P30041 224 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 CORO1AP31146 461 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 OXCT1P55809 520 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 PFKPQ01813 784 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 LAMB3Q13751 1172 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 TAF11Q15544 211 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 ACAD11Q709F0 780 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 PLD4Q96BZ4 506 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 RETREG1Q9H6L5 497 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 CYP4F12Q9HCS2 524 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 STX18Q9P2W9 335 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 CDYLQ9Y232 598 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 CLDN11O75508 207 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 SERPINB5P36952 375 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 ACTR3P61158 418 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 PDCD2Q16342 344 aaPredicted RBP21.59■■□□□ 1.05
CLN6-224ENST00000638076 TMEM207Q6UWW9 146 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 KDM1BQ8NB78 822 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 SHKBP1Q8TBC3 707 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 PEX13Q92968 403 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 TRIB3Q96RU7 358 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 TRPM5Q9NZQ8 1165 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 LRRC42Q9Y546 428 aa21.59■■□□□ 1.05
CLN6-224ENST00000638076 TMEM233B4DJY2 109 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 CD3EAPO15446 510 aaKnown RBP21.58■■□□□ 1.05
CLN6-224ENST00000638076 KDELR3O43731 214 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 RPP40O75818 363 aaKnown RBP21.58■■□□□ 1.05
CLN6-224ENST00000638076 NDST3O95803 873 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 RBP1P09455 135 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 IRF1P10914 325 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 HNRNPLP14866 589 aaKnown RBP eCLIP21.58■■□□□ 1.05
CLN6-224ENST00000638076 RGRP47804 291 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 ERFP50548 548 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 SLC34A1Q06495 639 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 CUL3Q13618 768 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 ACAP2Q15057 778 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 SH2D4BQ5SQS7 431 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 PIM3Q86V86 326 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 ZNF461Q8TAF7 563 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 CNDP1Q96KN2 507 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 EXOC2Q96KP1 924 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 NSMCE3Q96MG7 304 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 ANKRD27Q96NW4 1050 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 LENG8Q96PV6 779 aaPredicted RBP21.58■■□□□ 1.05
CLN6-224ENST00000638076 PSKH2Q96QS6 385 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 CYP4F11Q9HBI6 524 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 G3BP2Q9UN86 482 aaKnown RBP21.58■■□□□ 1.05
CLN6-224ENST00000638076 SSX2IPQ9Y2D8 614 aa21.58■■□□□ 1.05
CLN6-224ENST00000638076 MTF2Q9Y483 593 aaPredicted RBP21.58■■□□□ 1.05
CLN6-224ENST00000638076 CCDC162PA2VCL2 907 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 A8MT66 165 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 IPO13O94829 963 aaKnown RBP21.58■■□□□ 1.04
CLN6-224ENST00000638076 RHOCP08134 193 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 SCNN1BP51168 640 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 NSUN2Q08J23 767 aaKnown RBP eCLIP21.58■■□□□ 1.04
CLN6-224ENST00000638076 GPR158Q5T848 1215 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 FAM45BPQ6NSW5 357 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 FAM45AQ8TCE6 357 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 SH3RF2Q8TEC5 729 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 N4BP2L2Q92802 583 aaPredicted RBP21.58■■□□□ 1.04
CLN6-224ENST00000638076 RNF38Q9H0F5 515 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 CHD5Q8TDI0 1954 aa21.58■■□□□ 1.04
CLN6-224ENST00000638076 TSPAN3O60637 253 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 WISP3O95389 354 aaPredicted RBP21.57■■□□□ 1.04
CLN6-224ENST00000638076 SLC4A1P02730 911 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ITGAXP20702 1163 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 TAF12Q16514 161 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 NXNQ6DKJ4 435 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 MRNIPQ6NTE8 343 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 CCDC126Q96EE4 140 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 PAK6Q9NQU5 681 aaPredicted RBP21.57■■□□□ 1.04
CLN6-224ENST00000638076 GTSE1Q9NYZ3 720 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.57■■□□□ 1.04
CLN6-224ENST00000638076 C2orf78A6NCI8 922 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ABLIM3O94929 683 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 CD1EP15812 388 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 GCKP35557 465 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 PLK1P53350 603 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ZNF177Q13360 481 aaPredicted RBP21.57■■□□□ 1.04
CLN6-224ENST00000638076 PLD1Q13393 1074 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 SEMA3AQ14563 771 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 C16orf59Q7L2K0 433 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 DEFB107AQ8IZN7 70 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 GPR150Q8NGU9 434 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ACTRT2Q8TDY3 377 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 NRG4Q8WWG1 115 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 WBP2Q969T9 261 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 PHF21BQ96EK2 531 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 AGO1Q9UL18 857 aaKnown RBP21.57■■□□□ 1.04
CLN6-224ENST00000638076 ARHGAP26Q9UNA1 814 aa21.57■■□□□ 1.04
CLN6-224ENST00000638076 ILVBLA1L0T0 632 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 INSIG1O15503 277 aa21.56■■□□□ 1.04
CLN6-224ENST00000638076 PIK3R1P27986 724 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms