RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PLD5Q8N7P1 536 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 ATL2Q8NHH9 583 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 USP29Q9HBJ7 922 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 NT5MQ9NPB1 228 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 IMPACTQ9P2X3 320 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 PCDHGC4Q9Y5F7 938 aa22.46■■□□□ 1.19
SF1-220ENST00000626028 MYLKQ15746 1914 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 PSMD11O00231 422 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 APOL1O14791 398 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 SCAMP1O15126 338 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 PGLSO95336 258 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 CPP00450 1065 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 NR2C2P49116 596 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 MTM1Q13496 603 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 PDK1Q15118 436 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 ARMC12Q5T9G4 340 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 BZW1Q7L1Q6 419 aaKnown RBP22.45■■□□□ 1.18
SF1-220ENST00000626028 TMPRSS7Q7RTY8 843 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 SDR16C5Q8N3Y7 309 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 PNPLA1Q8N8W4 532 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 TPCN2Q8NHX9 752 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 SCRN2Q96FV2 425 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 NSMCE3Q96MG7 304 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 SEMA3CQ99985 751 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 MBNL1Q9NR56 388 aaKnown RBP22.45■■□□□ 1.18
SF1-220ENST00000626028 EVA1BQ9NVM1 165 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 RBM22Q9NW64 420 aaKnown RBP eCLIP22.45■■□□□ 1.182e-13■■■■■ 79.6
SF1-220ENST00000626028 NCKIPSDQ9NZQ3 722 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.45■■□□□ 1.18
SF1-220ENST00000626028 ALG6Q9Y672 507 aa22.45■■□□□ 1.18
SF1-220ENST00000626028 BTNL10A8MVZ5 291 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 TPP1O14773 563 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 SDC3O75056 442 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 NEBLO76041 1014 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 TOP3BO95985 862 aaKnown RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 KRT1P04264 644 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 CYP2A6P11509 494 aaPredicted RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 ACP1P24666 158 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 HTR1BP28222 390 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 CDC25BP30305 580 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 BLKP51451 505 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 MAXP61244 160 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 RPL26P61254 145 aaKnown RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 SLC10A2Q12908 348 aaPredicted RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 SMAD1Q15797 465 aaKnown RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 TAZQ16635 292 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 PROX2Q3B8N5 592 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 USP45Q70EL2 814 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 RAVER1Q8IY67 606 aaKnown RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 CCDC13Q8IYE1 715 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 FAM181AQ8N9Y4 354 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 CCNYQ8ND76 341 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 GATA6Q92908 595 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 MCCC1Q96RQ3 725 aaPredicted RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 TMEM121BQ9BXQ6 578 aaPredicted RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 KLK13Q9UKR3 277 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 DNPEPQ9ULA0 475 aa22.44■■□□□ 1.18
SF1-220ENST00000626028 RPL26L1Q9UNX3 145 aaKnown RBP22.44■■□□□ 1.18
SF1-220ENST00000626028 PPP1R12AO14974 1030 aaPredicted RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 FZD6O60353 706 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 RFPL3O75679 317 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 RECQL5O94762 991 aaPredicted RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 HOXC4P09017 264 aaPredicted RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 JUNDP17535 347 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 VIPR1P32241 457 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 ACADVLP49748 655 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 IFI35P80217 286 aaPredicted RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 TRAF2Q12933 501 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 TFDP2Q14188 446 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 UNQ6494/PRO21346Q6UXR6 183 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 ZNF548Q8NEK5 533 aaPredicted RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 PDCD6IPQ8WUM4 868 aaKnown RBP22.43■■□□□ 1.18
SF1-220ENST00000626028 SPASTQ9UBP0 616 aa22.43■■□□□ 1.18
SF1-220ENST00000626028 TRIM38O00635 465 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 SIGLEC6O43699 453 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 PROS1P07225 676 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 SPINK2P20155 84 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 CDKN2BP42772 138 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 ITKQ08881 620 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 EIF2B5Q13144 721 aaKnown RBP22.42■■□□□ 1.18
SF1-220ENST00000626028 INPP5AQ14642 412 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 TFDP3Q5H9I0 405 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 CCNI2Q6ZMN8 369 aaPredicted RBP22.42■■□□□ 1.18
SF1-220ENST00000626028 TMPRSS12Q86WS5 348 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 KATNAL2Q8IYT4 538 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 CBARPQ8N350 705 aaPredicted RBP22.42■■□□□ 1.18
SF1-220ENST00000626028 TXLNBQ8N3L3 684 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 COQ10AQ96MF6 247 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 OLFM3Q96PB7 478 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 IL12RB2Q99665 862 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 APOOQ9BUR5 198 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 SLC13A1Q9BZW2 595 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 UCKL1Q9NWZ5 548 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 B4GALT6Q9UBX8 382 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 COQ6Q9Y2Z9 468 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 HEY1Q9Y5J3 304 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 RAI2Q9Y5P3 530 aa22.42■■□□□ 1.18
SF1-220ENST00000626028 TTC24A2A3L6 582 aaPredicted RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 AQP9O43315 295 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 HEXIM1O94992 359 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms