RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 KPNA4O00629 521 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 ATP6V1B2P21281 511 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 KPNA2P52292 529 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 BFSP2Q13515 415 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 MAPRE2Q15555 327 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 CARTPTQ16568 116 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 LSMEM2Q8N112 164 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 GABPB2Q8TAK5 448 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 STYXQ8WUJ0 223 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 DUSP16Q9BY84 665 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SCN1AP35498 2009 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 A0A0G2JLL6 359 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 NPHS1O60500 1241 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 USP12O75317 370 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 CLPXO76031 633 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 NCAM1P13591 858 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 S100A1P23297 94 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 EEF1B2P24534 225 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SOX11P35716 441 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 AVPR1AP37288 418 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 ADIGQ0VDE8 80 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SCAPQ12770 1279 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 CDH17Q12864 832 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 OXA1LQ15070 435 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 AGKQ53H12 422 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 PRRT2Q7Z6L0 340 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 DSG4Q86SJ6 1040 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 DHFR2Q86XF0 187 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SPATA6LQ8N4H0 392 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 AFAP1L2Q8N4X5 818 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 FAR2Q96K12 515 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 UHRF1Q96T88 793 aaPredicted RBP13.1□□□□□ -0.31
CHD1L-210ENST00000622533 CSF3RQ99062 836 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 C1orf50Q9BV19 199 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 C1QTNF1Q9BXJ1 281 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 PALMDQ9NP74 551 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
CHD1L-210ENST00000622533 PFDN6O15212 129 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 BMP2P12643 396 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ERCC2P18074 760 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 PSMD8P48556 350 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TPI1P60174 286 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SLC36A3Q495N2 470 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 OTUD1Q5VV17 481 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 CAMK1DQ8IU85 385 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 LPIN3Q9BQK8 851 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 IL1RL2Q9HB29 575 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 PIRO00625 290 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 PHGDHO43175 533 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 MT-CO1P00395 513 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ADRA1BP35368 520 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SLC7A2P52569 658 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 LRP8Q14114 963 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SV2CQ496J9 727 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 NOTUMQ6P988 496 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ZC3HC1Q86WB0 502 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 GLT1D1Q96MS3 346 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 OMDQ99983 421 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SPAG4Q9NPE6 437 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 EGFL7Q9UHF1 273 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 OAZ3Q9UMX2 235 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 RUVBL2Q9Y230 463 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TOR1BO14657 336 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 HUS1O60921 280 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 MYO1DO94832 1006 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 SBK3P0C264 359 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 HPCAL1P37235 193 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 TAF6P49848 677 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-210ENST00000622533 RAD23AP54725 363 aa13.09□□□□□ -0.31
CHD1L-210ENST00000622533 STX5Q13190 355 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms