RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CXCL9Q07325 125 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CBLBQ13191 982 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ORC1Q13415 861 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 AQP6Q13520 282 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM132BQ14DG7 1078 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MAPK11Q15759 364 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 HIST2H2ACQ16777 129 aaPredicted RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PTPN20Q4JDL3 420 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 XKR3Q5GH77 459 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PXDC1Q5TGL8 231 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 HMBOX1Q6NT76 420 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ATG14Q6ZNE5 492 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CHSY3Q70JA7 882 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 HDDC2Q7Z4H3 204 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 WDR49Q8IV35 697 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CADM2Q8N3J6 435 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 NAT8LQ8N9F0 302 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 HTRA1Q92743 480 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 FKBP10Q96AY3 582 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SH3KBP1Q96B97 665 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TOE1Q96GM8 510 aaKnown RBP7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 TMEM80Q96HE8 168 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 DACH2Q96NX9 599 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CSF3RQ99062 836 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 GDF15Q99988 308 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 C9orf16Q9BUW7 83 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 WDR41Q9HAD4 459 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MYOZ2Q9NPC6 264 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 CISHQ9NSE2 258 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 ACOXLQ9NUZ1 547 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 SNX13Q9Y5W8 968 aa7.54□□□□□ -1.2
TRIM49B-202ENST00000622138 MGAMO43451 1857 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 DOCK1Q14185 1865 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SPATA31C2B4DYI2 1134 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 C9IYK1 514 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 K7ERI5 159 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SOCS2O14508 198 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CST8O60676 142 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 BCAS1O75363 584 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LRCH4O75427 683 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 OR7A10O76100 309 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PAHP00439 452 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CALB1P05937 261 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 FGF3P11487 239 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ICAM2P13598 275 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 MX2P20592 715 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RPL10P27635 214 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CAPGP40121 348 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ASPAP45381 313 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RAP1GAPP47736 663 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 BLVRAP53004 296 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 POU6F2P78424 691 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 S100A12P80511 92 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RAB6CQ53S08 254 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 XKRXQ6PP77 449 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CRTC3Q6UUV7 619 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF767PQ75MW2 155 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ERMP1Q7Z2K6 904 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LINC00523Q86TU6 105 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LILRB2Q8N423 598 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SFRP1Q8N474 314 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SVOPQ8N4V2 548 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CCDC185Q8N715 623 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 EMC1Q8N766 993 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LENG8Q96PV6 779 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PCYT2Q99447 389 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RAB6CQ9H0N0 254 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SPC25Q9HBM1 224 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TM9SF3Q9HD45 589 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 POLE4Q9NR33 117 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 IFT80Q9P2H3 777 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 A0A0G2JMP0 313 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 H0YCG3 227 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 DLGAP1O14490 977 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RFPL1O75677 317 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CSPG5O95196 566 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ATG7O95352 703 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LSM8O95777 96 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 JUNP05412 331 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 GNAO1P09471 354 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TGFB3P10600 412 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 DBTP11182 482 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 GLDCP23378 1020 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PSMA2P25787 234 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 HARS2P49590 506 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PRIM2P49643 509 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 MAPK10P53779 464 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 HMGCS2P54868 508 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PKNOX1P55347 436 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms